Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HMGN1P13-201ENST00000505795 138 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC006600.1-201ENST00000572529 153 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 MIR5094-201ENST00000578766 85 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC092447.9-201ENST00000603395 144 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AC016925.2-201ENST00000605108 242 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AL138825.1-201ENST00000618587 192 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 uc_338.22-201ENST00000622722 187 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 AL160413.1-201ENST00000622780 310 ntBASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RFWD3Q6PCD5 Y_RNA.27-201ENST00000362540 103 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNA5SP100-201ENST00000410903 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNA5SP59-201ENST00000410922 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 MTCO3P19-201ENST00000415864 321 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AL137792.2-201ENST00000443484 235 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNU6-625P-201ENST00000459412 107 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC069114.2-201ENST00000604699 304 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 AC090971.5-201ENST00000621102 293 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.49□□□□□ -2.17
RFWD3Q6PCD5 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR369-201ENST00000362155 70 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR515-2-201ENST00000384883 83 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR515-1-201ENST00000384884 83 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 SNORD78.2-201ENST00000391076 69 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 RN7SKP51-201ENST00000410781 304 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 RAB28P5-201ENST00000427490 651 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 FCF1P4-201ENST00000448326 183 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 RNU4-77P-201ENST00000516692 156 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 AL161670.1-201ENST00000554348 137 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MIR3684-201ENST00000579779 74 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 snoU13.31-201ENST00000607291 104 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 AL606534.2-204ENST00000635008 178 ntBASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
RFWD3Q6PCD5 MTND4P29-201ENST00000503122 1372 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 SNORA72.2-201ENST00000365028 127 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNY1P14-201ENST00000384426 108 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNU6-417P-201ENST00000384712 107 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNA5SP475-201ENST00000410568 110 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 SNORA40.14-201ENST00000516543 86 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AC023442.1-201ENST00000531247 422 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 MIR4498-201ENST00000577599 66 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AC022432.1-201ENST00000595739 310 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AC010900.2-201ENST00000604508 210 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 MIR3674-201ENST00000636576 68 ntBASIC1.47□□□□□ -2.17
RFWD3Q6PCD5 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-112P-201ENST00000363599 104 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-926P-201ENST00000384075 107 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 MRPL35P1-201ENST00000404272 572 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL160004.2-201ENST00000432935 350 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC245047.4-201ENST00000433189 144 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC009474.2-201ENST00000451383 136 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SNORD65B-201ENST00000459126 73 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RPL26P26-201ENST00000480251 434 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC010409.1-201ENST00000487382 476 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC108729.3-201ENST00000513484 108 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 RNU6-408P-201ENST00000515910 100 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC024995.1-201ENST00000523014 93 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AL137100.2-201ENST00000555786 315 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SNORD58B-201ENST00000607313 66 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC006157.1-201ENST00000611750 366 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC006435.5-201ENST00000624486 112 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 U6.92-201ENST00000636464 89 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AC010615.1-201ENST00000594254 1764 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
RFWD3Q6PCD5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RFWD3Q6PCD5 RNU6-961P-201ENST00000363893 105 ntBASIC1.45□□□□□ -2.18
RFWD3Q6PCD5 Y_RNA.813-201ENST00000364639 102 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms