Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 PART1_1.1-201ENST00000611761 217 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 AC240442.1-201ENST00000616055 283 ntBASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LYSMD4Q5XG99 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.27-201ENST00000362540 103 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.269-201ENST00000364685 89 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.458-201ENST00000384240 102 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-1011P-201ENST00000384668 107 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-823P-201ENST00000391042 103 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-130P-201ENST00000411112 103 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 AC016909.1-201ENST00000415916 166 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 AC113618.1-201ENST00000416747 285 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-625P-201ENST00000459412 107 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-397P-201ENST00000516226 104 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-1041P-201ENST00000516254 102 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RNU6-911P-201ENST00000516523 104 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 SNORA40.14-201ENST00000516543 86 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 MIR2355-201ENST00000517199 87 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 MIR4680-201ENST00000580906 66 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 AC006001.4-201ENST00000622243 395 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 AC099654.10-201ENST00000640395 161 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LYSMD4Q5XG99 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.202-201ENST00000364083 110 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 RNU6-454P-201ENST00000364292 107 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 SNORD14.1-201ENST00000365609 90 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.389-201ENST00000383924 113 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.498-201ENST00000384460 102 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 MIR499A-201ENST00000384903 122 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 RAB28P5-201ENST00000427490 651 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 AC011406.1-201ENST00000512440 370 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 DNAJC19P9-201ENST00000555084 351 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 AC022432.1-201ENST00000595739 310 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 AC124312.5-201ENST00000604451 268 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 AL512598.1-201ENST00000610158 273 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 MIR8070-201ENST00000616510 88 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 snoZ196.1-201ENST00000625269 89 ntBASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.74□□□□□ -2.13
LYSMD4Q5XG99 RNU6-862P-201ENST00000362804 105 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 U3.8-201ENST00000363675 217 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 SNORA25.9-201ENST00000365087 128 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.424-201ENST00000384063 103 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 SNORD78.2-201ENST00000391076 69 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 MIR1185-2-201ENST00000408687 86 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 RNU2-40P-201ENST00000410833 196 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 AC027419.1-201ENST00000522976 328 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 MIR4713-201ENST00000582691 75 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 AP000553.5-201ENST00000641933 54 ntBASIC1.73□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.101-201ENST00000363154 102 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 RNU6-626P-201ENST00000363354 107 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 SNORA33-201ENST00000363664 130 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 RNU6-20P-201ENST00000384106 107 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 Y_RNA.471-201ENST00000384312 102 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 MTCO3P19-201ENST00000415864 321 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 AC099677.2-201ENST00000436385 175 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 RPEP5-201ENST00000441137 268 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 FCF1P4-201ENST00000448326 183 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 NDUFB4P10-201ENST00000452541 359 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 RNU6-1046P-201ENST00000516538 107 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 AC023442.1-201ENST00000531247 422 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 RPS29P30-201ENST00000600975 111 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 AL353621.2-201ENST00000605340 133 ntBASIC1.72□□□□□ -2.13
LYSMD4Q5XG99 CENPCP1-201ENST00000533085 2578 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 Y_RNA.158-201ENST00000363651 101 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 RNU1-96P-201ENST00000364163 162 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 Y_RNA.508-201ENST00000384502 114 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 AC009310.1-201ENST00000414414 451 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 RNU6-717P-201ENST00000459076 104 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 U8.20-201ENST00000459445 131 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 RNU6-221P-201ENST00000459541 99 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 AC010655.3-201ENST00000478818 450 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 AC074133.1-201ENST00000515696 183 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 RNU6-475P-201ENST00000516073 104 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
LYSMD4Q5XG99 AC025647.1-201ENST00000517879 253 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms