Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.21□□□□□ -2.44
TPM4P67936 SNORD118-201ENST00000363593 134 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 AC018865.2-201ENST00000423631 129 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.22□□□□□ -2.44
TPM4P67936 AL033528.1-201ENST00000453780 140 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 RNA5SP20-201ENST00000515976 84 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 SNORA18.7-201ENST00000516910 131 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.22□□□□□ -2.44
TPM4P67936 AL158209.2-201ENST00000619266 216 ntBASIC-0.22□□□□□ -2.44
TPM4P67936 RNU6-181P-201ENST00000363225 107 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 AC117470.1-201ENST00000381974 330 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.23□□□□□ -2.45
TPM4P67936 AL139396.1-201ENST00000421137 167 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 RNU6-445P-201ENST00000516949 107 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 MTND4P7-201ENST00000523876 130 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 AC112693.2-201ENST00000556538 232 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 AC004223.4-201ENST00000612426 332 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 AC016597.2-201ENST00000613256 341 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 AC010487.4-201ENST00000637027 61 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.23□□□□□ -2.45
TPM4P67936 RNU6-407P-201ENST00000365280 104 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 SNORA40.3-201ENST00000390964 122 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 MTND4P32-201ENST00000437189 1237 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 AC018710.1-201ENST00000506509 158 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 RNU6-977P-201ENST00000516411 103 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 MIR2115-201ENST00000516657 100 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.24□□□□□ -2.45
TPM4P67936 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.24□□□□□ -2.45
TPM4P67936 AL157687.1-201ENST00000554853 619 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 MIR548AO-201ENST00000579992 96 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 SNORA25.18-201ENST00000607153 114 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 AC104260.1-201ENST00000616660 539 ntBASIC-0.24□□□□□ -2.45
TPM4P67936 SNORA27.1-201ENST00000362604 124 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 RNU6-280P-201ENST00000364145 104 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 RNU4-9P-201ENST00000364951 139 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.25□□□□□ -2.45
TPM4P67936 AL359672.1-201ENST00000442302 409 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 MTND2P14-201ENST00000482139 351 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 AC093303.1-201ENST00000514549 295 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 RNA5SP436-201ENST00000516020 115 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 RNU6-189P-201ENST00000516120 101 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 RNU6-311P-201ENST00000516224 102 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 RNA5SP94-201ENST00000516917 108 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 MTND2P38-201ENST00000522536 667 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.25□□□□□ -2.45
TPM4P67936 RPL23AP91-201ENST00000569211 455 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 AC011458.1-201ENST00000604034 617 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 MIR4251-201ENST00000635819 61 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 MIR371B-201ENST00000638082 66 ntBASIC-0.25□□□□□ -2.45
TPM4P67936 SNORD68-201ENST00000363214 84 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 U8.5-201ENST00000364528 136 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 MIR153-2-201ENST00000385225 87 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 AL137792.2-201ENST00000443484 235 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 MTCO1P29-201ENST00000496868 288 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 MIR3684-201ENST00000579779 74 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 AC104408.1-201ENST00000605241 170 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 uc_338.16-201ENST00000621804 95 ntBASIC-0.26□□□□□ -2.45
TPM4P67936 SNORD50.1-201ENST00000362987 71 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 RNU6-159P-201ENST00000391080 106 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 MTCO2P8-201ENST00000412213 658 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 MTCYBP8-201ENST00000422855 651 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 AL593851.1-201ENST00000426171 157 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 Z82188.1-201ENST00000436709 154 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 AC079354.2-201ENST00000453523 154 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 SNORD123-201ENST00000459473 70 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 MTCO3P38-201ENST00000468910 766 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 RNU4-77P-201ENST00000516692 156 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 SNORA18.6-201ENST00000516792 115 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.27□□□□□ -2.45
TPM4P67936 RNA5SP432-201ENST00000362480 116 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 SNORD114-5-201ENST00000362928 70 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 RNU6-117P-201ENST00000365415 107 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 RNU6-933P-201ENST00000384424 107 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
TPM4P67936 AL590002.1-201ENST00000406554 418 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.28□□□□□ -2.45
TPM4P67936 BX295541.1-201ENST00000417774 250 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 SEPT7P4-201ENST00000437076 306 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.28□□□□□ -2.45
TPM4P67936 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.28□□□□□ -2.45
TPM4P67936 AC092436.3-201ENST00000511788 257 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 MIR4762-201ENST00000585261 75 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC012433.1-201ENST00000588916 398 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC008536.2-201ENST00000607284 349 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC022709.1-201ENST00000615967 87 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC103705.1-201ENST00000619013 241 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC006504.8-201ENST00000621046 635 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 AC010608.3-201ENST00000625048 527 ntBASIC-0.28□□□□□ -2.45
TPM4P67936 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.28□□□□□ -2.45
TPM4P67936 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 PIGPP4-201ENST00000584447 307 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 MIR4424-201ENST00000585257 86 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms