Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
EPHB3P54753 RNU6-235P-201ENST00000362644 107 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 SNORD56.3-201ENST00000363507 71 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RNU6-1305P-201ENST00000364353 104 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 Y_RNA.294-201ENST00000364916 102 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RNU1-57P-201ENST00000384491 166 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 MIR518C-201ENST00000384822 101 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 AL355796.1-201ENST00000406706 323 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
EPHB3P54753 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.07□□□□□ -1.92
EPHB3P54753 SNRPGP8-201ENST00000454064 226 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 HMGN2P9-201ENST00000476875 229 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RPL23AP94-201ENST00000512518 302 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RNU5E-3P-201ENST00000515913 68 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 RNU6-1337P-201ENST00000516525 95 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 AL160236.1-201ENST00000556317 195 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 MTND5P34-201ENST00000568888 325 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 AC107294.3-201ENST00000609211 526 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 AL021707.8-201ENST00000609428 183 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.07□□□□□ -1.92
EPHB3P54753 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
EPHB3P54753 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.07□□□□□ -1.92
EPHB3P54753 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.06□□□□□ -1.92
EPHB3P54753 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
EPHB3P54753 RNU6-674P-201ENST00000363831 107 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 RNU6-978P-201ENST00000364371 103 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 Y_RNA.309-201ENST00000365046 111 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 SNORD116-13-201ENST00000384408 92 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 RNU6-750P-201ENST00000390946 107 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 SNORA12-201ENST00000391162 147 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 RNA5SP496-201ENST00000391240 109 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 AL512604.1-201ENST00000404812 257 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 SNORA79-201ENST00000408376 140 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 Y_RNA.622-201ENST00000411091 108 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
EPHB3P54753 AC063976.4-201ENST00000421971 163 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 SNORA72.7-201ENST00000516349 94 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 RNU7-116P-201ENST00000516940 62 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 HSPE1P18-201ENST00000517602 280 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
EPHB3P54753 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
EPHB3P54753 MIR3121-201ENST00000579680 77 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 RPL12P50-201ENST00000603116 116 ntBASIC3.06□□□□□ -1.92
EPHB3P54753 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
EPHB3P54753 MTND5P32-201ENST00000560711 1802 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
EPHB3P54753 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.05□□□□□ -1.92
EPHB3P54753 Y_RNA.120-201ENST00000363304 110 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 RNU1-105P-201ENST00000363470 161 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 SNORD32B-201ENST00000364460 84 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 SNORA22-201ENST00000383907 134 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 RNU6-147P-201ENST00000383983 107 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 SNORA20B-201ENST00000384220 132 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 AL139095.1-201ENST00000404326 391 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 RNU2-55P-201ENST00000411146 174 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 AL121890.1-201ENST00000435457 205 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 AL158147.1-201ENST00000443970 75 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 Y_RNA.692-201ENST00000516627 105 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 RNU6-197P-201ENST00000516680 100 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 AC079598.5-201ENST00000547460 117 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.05□□□□□ -1.92
EPHB3P54753 AC110079.1-202ENST00000635213 138 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 MIR4679-1-201ENST00000637619 75 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.05□□□□□ -1.92
EPHB3P54753 AC092435.3-201ENST00000565538 3654 ntBASIC3.05□□□□□ -1.92
EPHB3P54753 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
EPHB3P54753 snoU2_19.1-201ENST00000362361 80 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 SNORA27.1-201ENST00000362604 124 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 RNU6-271P-201ENST00000363858 105 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 RNU6-484P-201ENST00000384016 107 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 CYCSP49-201ENST00000420810 319 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 RNU6-437P-201ENST00000459408 95 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 RPS26P55-201ENST00000471178 356 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.04□□□□□ -1.92
EPHB3P54753 POLR3GP1-201ENST00000594073 261 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 AL031274.2-201ENST00000599419 203 ntBASIC3.04□□□□□ -1.92
EPHB3P54753 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
EPHB3P54753 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EPHB3P54753 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.04□□□□□ -1.92
EPHB3P54753 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
EPHB3P54753 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.03□□□□□ -1.92
EPHB3P54753 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
EPHB3P54753 RNA5SP184-201ENST00000411071 108 ntBASIC3.03□□□□□ -1.92
EPHB3P54753 AL135786.1-201ENST00000415892 214 ntBASIC3.03□□□□□ -1.92
EPHB3P54753 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.03□□□□□ -1.92
EPHB3P54753 AC009969.1-201ENST00000438726 172 ntBASIC3.03□□□□□ -1.92
EPHB3P54753 RN7SKP132-201ENST00000516001 208 ntBASIC3.03□□□□□ -1.92
EPHB3P54753 SNORD33.1-201ENST00000516213 88 ntBASIC3.03□□□□□ -1.92
EPHB3P54753 AC005972.2-201ENST00000604690 348 ntBASIC3.03□□□□□ -1.92
EPHB3P54753 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
EPHB3P54753 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
EPHB3P54753 U8.1-201ENST00000362843 134 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 DYNLT3P1-201ENST00000378574 347 ntBASIC3.02□□□□□ -1.93
EPHB3P54753 RNU6-1336P-201ENST00000383886 109 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 328.4 ms