Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR1302-9-201ENST00000408365 138 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 MIR1302-10-201ENST00000408734 138 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 RNU2-2P-201ENST00000410396 191 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 COX6CP10-201ENST00000416832 224 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 MCFD2P1-201ENST00000417812 300 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 AL021397.1-201ENST00000451806 248 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 SNORA25.10-201ENST00000515926 124 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 SNORA70.12-201ENST00000516084 153 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 RN7SKP295-201ENST00000517264 153 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ABCD3P28288 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCD3P28288 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.86□□□□□ -2.11
ABCD3P28288 AL390123.1-201ENST00000603216 237 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 MIR1302-2-201ENST00000607096 138 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 AC011476.5-201ENST00000615594 130 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 AC006026.1-201ENST00000444025 1803 ntBASIC1.86□□□□□ -2.11
ABCD3P28288 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCD3P28288 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ABCD3P28288 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ABCD3P28288 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
ABCD3P28288 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.85□□□□□ -2.11
ABCD3P28288 RNA5SP432-201ENST00000362480 116 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU1-22P-201ENST00000363334 158 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU6-626P-201ENST00000363354 107 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU6-407P-201ENST00000365280 104 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU6-20P-201ENST00000384106 107 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU2-54P-201ENST00000410299 190 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 AL390729.2-201ENST00000416137 156 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 MTND4P19-201ENST00000446659 478 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 Y_RNA.631-201ENST00000459607 101 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU6-1278P-201ENST00000516130 107 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RNU7-172P-201ENST00000517125 64 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 RPL21P9-201ENST00000556149 474 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.85□□□□□ -2.11
ABCD3P28288 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ABCD3P28288 AC092881.1-201ENST00000638218 2733 ntBASIC1.85□□□□□ -2.11
ABCD3P28288 AC005592.1-201ENST00000566527 1640 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 Y_RNA.128-201ENST00000363391 112 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 Y_RNA.361-201ENST00000365515 120 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 SNORD14.1-201ENST00000365609 90 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 MIR562-201ENST00000384894 95 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.84□□□□□ -2.11
ABCD3P28288 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 RPS26P55-201ENST00000471178 356 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 AC007485.1-201ENST00000616755 206 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 AC134503.1-201ENST00000633048 54 ntBASIC1.84□□□□□ -2.11
ABCD3P28288 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ABCD3P28288 AC018630.2-201ENST00000534866 2403 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 Y_RNA.80-201ENST00000362996 102 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 SNORD115-30-201ENST00000364117 82 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 Y_RNA.462-201ENST00000384268 102 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 MIR1267-201ENST00000408723 78 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCD3P28288 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 RPS27P1-201ENST00000450552 247 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 U8.20-201ENST00000459445 131 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCD3P28288 RNU6-237P-201ENST00000515985 71 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 RNU6-988P-201ENST00000519081 107 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCD3P28288 AC040926.1-201ENST00000530195 238 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 MIR4524B-201ENST00000581569 115 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
ABCD3P28288 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
ABCD3P28288 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ABCD3P28288 Y_RNA.11-201ENST00000362375 109 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 SNORD114-1-201ENST00000362705 72 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 Y_RNA.101-201ENST00000363154 102 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 Y_RNA.813-201ENST00000364639 102 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 Y_RNA.424-201ENST00000384063 103 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 RPL21P1-201ENST00000399532 476 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 MRPL42P3-201ENST00000401492 326 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 RNU5A-5P-201ENST00000411054 116 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 AC245047.3-201ENST00000429428 127 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
ABCD3P28288 AL163540.1-201ENST00000485382 386 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 MIR5089-201ENST00000580047 84 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 AC022217.4-201ENST00000604389 163 ntBASIC1.82□□□□□ -2.12
ABCD3P28288 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCD3P28288 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
ABCD3P28288 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ABCD3P28288 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
ABCD3P28288 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ABCD3P28288 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 Y_RNA.28-201ENST00000362554 111 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 Y_RNA.439-201ENST00000384119 94 ntBASIC1.81□□□□□ -2.12
ABCD3P28288 Y_RNA.458-201ENST00000384240 102 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms