Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORD115-46-201ENST00000390982 71 ntBASIC2.17□□□□□ -2.06
MMP3P08254 RNA5SP475-201ENST00000410568 110 ntBASIC2.17□□□□□ -2.06
MMP3P08254 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.17□□□□□ -2.06
MMP3P08254 AC025465.3-201ENST00000510570 311 ntBASIC2.17□□□□□ -2.06
MMP3P08254 RNU6-155P-201ENST00000516347 100 ntBASIC2.17□□□□□ -2.06
MMP3P08254 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
MMP3P08254 MIR4423-201ENST00000580922 80 ntBASIC2.17□□□□□ -2.06
MMP3P08254 AC011373.1-201ENST00000607270 237 ntBASIC2.17□□□□□ -2.06
MMP3P08254 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MMP3P08254 Y_RNA.376-201ENST00000365638 108 ntBASIC2.16□□□□□ -2.06
MMP3P08254 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
MMP3P08254 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
MMP3P08254 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
MMP3P08254 RPL23AP63-201ENST00000498752 471 ntBASIC2.16□□□□□ -2.06
MMP3P08254 HMGB3P17-201ENST00000504195 649 ntBASIC2.16□□□□□ -2.06
MMP3P08254 AC027419.1-201ENST00000522976 328 ntBASIC2.16□□□□□ -2.06
MMP3P08254 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.16□□□□□ -2.06
MMP3P08254 CYCSP26-201ENST00000534107 320 ntBASIC2.16□□□□□ -2.06
MMP3P08254 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.16□□□□□ -2.06
MMP3P08254 SNORD14A-201ENST00000606526 91 ntBASIC2.16□□□□□ -2.06
MMP3P08254 7SK.10-201ENST00000621414 298 ntBASIC2.16□□□□□ -2.06
MMP3P08254 MIR8062-201ENST00000621515 85 ntBASIC2.16□□□□□ -2.06
MMP3P08254 AC006001.4-201ENST00000622243 395 ntBASIC2.16□□□□□ -2.06
MMP3P08254 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MMP3P08254 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.15□□□□□ -2.07
MMP3P08254 Y_RNA.331-201ENST00000365267 102 ntBASIC2.15□□□□□ -2.07
MMP3P08254 Y_RNA.446-201ENST00000384178 104 ntBASIC2.15□□□□□ -2.07
MMP3P08254 RNU6-472P-201ENST00000384299 107 ntBASIC2.15□□□□□ -2.07
MMP3P08254 Y_RNA.541-201ENST00000384640 113 ntBASIC2.15□□□□□ -2.07
MMP3P08254 RNU6-21P-201ENST00000384710 107 ntBASIC2.15□□□□□ -2.07
MMP3P08254 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
MMP3P08254 MIR1185-2-201ENST00000408687 86 ntBASIC2.15□□□□□ -2.07
MMP3P08254 AC123900.1-201ENST00000420390 96 ntBASIC2.15□□□□□ -2.07
MMP3P08254 TOMM22P2-201ENST00000430735 237 ntBASIC2.15□□□□□ -2.07
MMP3P08254 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
MMP3P08254 AC114982.1-201ENST00000469402 321 ntBASIC2.15□□□□□ -2.07
MMP3P08254 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
MMP3P08254 RNU6-1053P-201ENST00000515930 101 ntBASIC2.15□□□□□ -2.07
MMP3P08254 RNU6-496P-201ENST00000516145 99 ntBASIC2.15□□□□□ -2.07
MMP3P08254 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.15□□□□□ -2.07
MMP3P08254 MIR4498-201ENST00000577599 66 ntBASIC2.15□□□□□ -2.07
MMP3P08254 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.15□□□□□ -2.07
MMP3P08254 AL590240.4-201ENST00000616908 390 ntBASIC2.15□□□□□ -2.07
MMP3P08254 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.15□□□□□ -2.07
MMP3P08254 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
MMP3P08254 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.15□□□□□ -2.07
MMP3P08254 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.15□□□□□ -2.07
MMP3P08254 ZNF720P1-201ENST00000562403 1939 ntBASIC2.15□□□□□ -2.07
MMP3P08254 Y_RNA.84-201ENST00000363011 104 ntBASIC2.14□□□□□ -2.07
MMP3P08254 SNORD114-6-201ENST00000364393 72 ntBASIC2.14□□□□□ -2.07
MMP3P08254 RNU6-463P-201ENST00000384340 107 ntBASIC2.14□□□□□ -2.07
MMP3P08254 RNU5A-5P-201ENST00000411054 116 ntBASIC2.14□□□□□ -2.07
MMP3P08254 RNU6-1199P-201ENST00000411249 104 ntBASIC2.14□□□□□ -2.07
MMP3P08254 AC016909.1-201ENST00000415916 166 ntBASIC2.14□□□□□ -2.07
MMP3P08254 MTCO1P44-201ENST00000441935 243 ntBASIC2.14□□□□□ -2.07
MMP3P08254 HSPE1P25-201ENST00000455484 251 ntBASIC2.14□□□□□ -2.07
MMP3P08254 MIR3126-201ENST00000577443 74 ntBASIC2.14□□□□□ -2.07
MMP3P08254 MIR3145-201ENST00000580727 82 ntBASIC2.14□□□□□ -2.07
MMP3P08254 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.14□□□□□ -2.07
MMP3P08254 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.14□□□□□ -2.07
MMP3P08254 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
MMP3P08254 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.14□□□□□ -2.07
MMP3P08254 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
MMP3P08254 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MMP3P08254 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MMP3P08254 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MMP3P08254 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MMP3P08254 SNORD81.1-201ENST00000363064 77 ntBASIC2.13□□□□□ -2.07
MMP3P08254 Y_RNA.230-201ENST00000364348 109 ntBASIC2.13□□□□□ -2.07
MMP3P08254 SNORD63-201ENST00000384262 68 ntBASIC2.13□□□□□ -2.07
MMP3P08254 Y_RNA.462-201ENST00000384268 102 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AL355497.1-201ENST00000406262 551 ntBASIC2.13□□□□□ -2.07
MMP3P08254 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AC108667.1-201ENST00000428618 249 ntBASIC2.13□□□□□ -2.07
MMP3P08254 MRPS10P1-201ENST00000448483 130 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AC074290.1-201ENST00000448883 135 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AL161670.1-201ENST00000554348 137 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.13□□□□□ -2.07
MMP3P08254 MIR3149-201ENST00000584629 83 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AC022441.3-201ENST00000605737 136 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AC012640.5-201ENST00000623897 319 ntBASIC2.13□□□□□ -2.07
MMP3P08254 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
MMP3P08254 MIR410-201ENST00000362222 80 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNU6-324P-201ENST00000363957 106 ntBASIC2.12□□□□□ -2.07
MMP3P08254 Y_RNA.193-201ENST00000363979 102 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
MMP3P08254 Y_RNA.581-201ENST00000391017 97 ntBASIC2.12□□□□□ -2.07
MMP3P08254 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MMP3P08254 MIR1302-3-201ENST00000408128 138 ntBASIC2.12□□□□□ -2.07
MMP3P08254 MIR1302-6-201ENST00000408466 90 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNU2-54P-201ENST00000410299 190 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNU6-1203P-201ENST00000410703 110 ntBASIC2.12□□□□□ -2.07
MMP3P08254 EDDM3CP-201ENST00000415977 425 ntBASIC2.12□□□□□ -2.07
MMP3P08254 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
MMP3P08254 TRBVB-201ENST00000477100 408 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNU6-1143P-201ENST00000516125 104 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNU6-948P-201ENST00000516374 107 ntBASIC2.12□□□□□ -2.07
MMP3P08254 SCARNA24.2-201ENST00000516968 130 ntBASIC2.12□□□□□ -2.07
MMP3P08254 RNU2-12P-201ENST00000517216 168 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 244.1 ms