Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-950P-201ENST00000384651 107 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 SNORA75.6-201ENST00000391318 127 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AC114482.1-201ENST00000418010 247 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AC005002.2-201ENST00000438228 269 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.653-201ENST00000459091 95 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AL163195.1-201ENST00000496941 348 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 RNA5SP445-201ENST00000515889 115 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 RNU1-142P-201ENST00000516682 145 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 UBE2V2P2-201ENST00000587677 504 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AL359075.3-201ENST00000613288 217 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 AC104260.1-201ENST00000616660 539 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 MTND4LP32-201ENST00000636111 270 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.259-201ENST00000364619 101 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-1297P-201ENST00000384415 104 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 RNA5SP109-201ENST00000391010 116 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 COX6CP10-201ENST00000416832 224 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 MTCO3P10-201ENST00000455912 772 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 AL137100.2-201ENST00000555786 315 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 MIR1302-1-201ENST00000637932 143 ntBASIC1.41□□□□□ -2.18
ATG4BQ9Y4P1 MIR378A-201ENST00000362177 66 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 RNU4-13P-201ENST00000364019 141 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.303-201ENST00000364998 94 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 MIR194-1-201ENST00000384892 85 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 MIR625-201ENST00000385047 85 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-1156P-201ENST00000410365 100 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 PCNPP5-201ENST00000452246 481 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 RNU7-34P-201ENST00000459394 64 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 AC105758.1-201ENST00000506038 399 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-902P-201ENST00000517212 91 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 AC023157.2-201ENST00000540596 141 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 MIR4801-201ENST00000582704 82 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 AC022432.1-201ENST00000595739 310 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 MTND5P10-201ENST00000603719 1809 ntBASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.19
ATG4BQ9Y4P1 ICE2P2-201ENST00000483823 2787 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 RNY3P11-201ENST00000364153 102 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.384-201ENST00000383909 102 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.577-201ENST00000384794 101 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 SNORA69.1-201ENST00000390904 137 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 MTCYBP4-201ENST00000401524 249 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 ELOCP21-201ENST00000412558 336 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 BTF3P4-201ENST00000418852 495 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 SNORD65B-201ENST00000459126 73 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 RNU7-169P-201ENST00000459456 61 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 RPS26P55-201ENST00000471178 356 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 RPS26P45-201ENST00000471748 340 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 RPS27P22-201ENST00000478056 241 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 CYCSP23-201ENST00000519781 313 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 AC018448.1-201ENST00000552843 316 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 AC095038.3-201ENST00000634439 195 ntBASIC1.39□□□□□ -2.19
ATG4BQ9Y4P1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC073544.1-201ENST00000600110 1595 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-271P-201ENST00000363858 105 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.387-201ENST00000383918 102 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-318P-201ENST00000384283 103 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AL606517.2-201ENST00000442855 241 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-625P-201ENST00000459412 107 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC010469.2-201ENST00000496412 480 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC091951.2-201ENST00000500762 203 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 SNORA40.9-201ENST00000515895 93 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-470P-201ENST00000515954 104 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-277P-201ENST00000516272 106 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms