Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNU6-626P-201ENST00000363354 107 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.230-201ENST00000364348 109 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.376-201ENST00000365638 108 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-1264P-201ENST00000383891 107 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.461-201ENST00000384263 103 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.483-201ENST00000384380 101 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 MIR215-201ENST00000384858 110 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.581-201ENST00000391017 97 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 MIR1302-3-201ENST00000408128 138 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 RN7SKP223-201ENST00000410582 62 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 SRIP3-201ENST00000413200 219 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 AC245102.2-201ENST00000448956 180 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 NDUFB4P10-201ENST00000452541 359 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 AC016925.1-201ENST00000458303 298 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 RNU7-14P-201ENST00000459331 62 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-966P-201ENST00000516479 104 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 AP000942.4-201ENST00000604811 241 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 U4.1-201ENST00000620349 87 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 AC127459.3-201ENST00000624328 466 ntBASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SLC52A3Q9NQ40 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 SNORD31B-201ENST00000364977 69 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-505P-201ENST00000384427 107 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.556-201ENST00000384677 113 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 MIR29C-201ENST00000385231 88 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 HMGN2P39-201ENST00000398005 273 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 MIR1283-1-201ENST00000408494 87 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 HSPE1P25-201ENST00000455484 251 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 snoU13.15-201ENST00000459407 104 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-496P-201ENST00000516145 99 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 AC004817.2-201ENST00000561794 651 ntBASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SLC52A3Q9NQ40 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.84-201ENST00000363011 104 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.101-201ENST00000363154 102 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 U3.8-201ENST00000363675 217 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-454P-201ENST00000364292 107 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.286-201ENST00000364813 102 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-702P-201ENST00000364982 107 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 MIR548B-201ENST00000385247 97 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 MIR300-201ENST00000401138 83 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-1203P-201ENST00000410703 110 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 TOMM22P2-201ENST00000430735 237 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-570P-201ENST00000517051 105 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 AC005176.2-201ENST00000596933 147 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 AP001282.2-201ENST00000616149 309 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 MIR7843-201ENST00000622274 79 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 AC091932.3-201ENST00000624223 323 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
SLC52A3Q9NQ40 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 MIR340-201ENST00000362125 95 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 SNORD113-8-201ENST00000363497 74 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-1305P-201ENST00000364353 104 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-1175P-201ENST00000365200 107 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.498-201ENST00000384460 102 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 Y_RNA.541-201ENST00000384640 113 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU4-30P-201ENST00000410245 143 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU5A-5P-201ENST00000411054 116 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU6-1199P-201ENST00000411249 104 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 HMGN2P18-201ENST00000450680 270 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNA5SP490-201ENST00000517141 136 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 AC023157.2-201ENST00000540596 141 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 AC007229.1-201ENST00000590455 412 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 AC022441.3-201ENST00000605737 136 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 293.4 ms