Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 Y_RNA.164-201ENST00000363709 102 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 Y_RNA.187-201ENST00000363918 113 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 RNU6-1040P-201ENST00000383974 107 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 MIR30A-201ENST00000385092 71 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RFFLQ8WZ73 RNU6-1186P-201ENST00000410429 97 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 ELOCP21-201ENST00000412558 336 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC073910.1-201ENST00000445047 438 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.92□□□□□ -2.1
RFFLQ8WZ73 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC107393.1-201ENST00000512403 346 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 SNORA40.9-201ENST00000515895 93 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC027419.1-201ENST00000522976 328 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.92□□□□□ -2.1
RFFLQ8WZ73 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 MIR3684-201ENST00000579779 74 ntBASIC1.92□□□□□ -2.1
RFFLQ8WZ73 Y_RNA.428-201ENST00000384078 102 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 RNU6-1310P-201ENST00000384153 107 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 RNU6-318P-201ENST00000384283 103 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 COX6CP10-201ENST00000416832 224 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 SNORD19B-201ENST00000459623 84 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 AL163195.1-201ENST00000496941 348 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 AC010598.1-201ENST00000510378 103 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 MTND3P22-201ENST00000510932 243 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
RFFLQ8WZ73 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.91□□□□□ -2.1
RFFLQ8WZ73 MIR3683-201ENST00000580847 82 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 snoU13.31-201ENST00000607291 104 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 AL357075.2-201ENST00000614906 189 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 AC112487.2-201ENST00000637950 304 ntBASIC1.91□□□□□ -2.1
RFFLQ8WZ73 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 SNORA63D-201ENST00000364359 132 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 MIR1267-201ENST00000408723 78 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.9□□□□□ -2.11
RFFLQ8WZ73 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.9□□□□□ -2.11
RFFLQ8WZ73 MTATP6P23-201ENST00000440153 476 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 RPS27P22-201ENST00000478056 241 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 Y_RNA.675-201ENST00000516389 149 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 RNU6-699P-201ENST00000517081 110 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 RNA5SP437-201ENST00000517249 129 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 AC093027.1-201ENST00000546698 429 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 AL008636.1-201ENST00000625038 1018 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RFFLQ8WZ73 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.9□□□□□ -2.11
RFFLQ8WZ73 RNY3P11-201ENST00000364153 102 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 MIR559-201ENST00000385188 96 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.89□□□□□ -2.11
RFFLQ8WZ73 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.89□□□□□ -2.11
RFFLQ8WZ73 MRPS18CP6-201ENST00000423587 223 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 AC003989.2-201ENST00000440224 169 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 RPS29P11-201ENST00000496507 171 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.89□□□□□ -2.11
RFFLQ8WZ73 AC008834.1-201ENST00000511612 175 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 SNORD116.3-201ENST00000517176 78 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
RFFLQ8WZ73 U2.1-201ENST00000618978 145 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 U6.73-201ENST00000619194 103 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 MIR3674-201ENST00000636576 68 ntBASIC1.89□□□□□ -2.11
RFFLQ8WZ73 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RFFLQ8WZ73 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RFFLQ8WZ73 Y_RNA.58-201ENST00000362807 102 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 Y_RNA.154-201ENST00000363624 102 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 RNY3P1-201ENST00000365085 102 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 RNY3-201ENST00000365484 102 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 RNU6-926P-201ENST00000384075 107 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 SNORA17.3-201ENST00000391159 129 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 RAB28P5-201ENST00000427490 651 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 snoU13.27-201ENST00000459278 104 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 AC010469.2-201ENST00000496412 480 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
RFFLQ8WZ73 RNU6-408P-201ENST00000515910 100 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.88□□□□□ -2.11
RFFLQ8WZ73 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.88□□□□□ -2.11
RFFLQ8WZ73 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
RFFLQ8WZ73 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RFFLQ8WZ73 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFFLQ8WZ73 RNU4-73P-201ENST00000363164 141 ntBASIC1.87□□□□□ -2.11
RFFLQ8WZ73 RNU6-950P-201ENST00000384651 107 ntBASIC1.87□□□□□ -2.11
RFFLQ8WZ73 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RFFLQ8WZ73 AC022028.1-201ENST00000412054 408 ntBASIC1.87□□□□□ -2.11
RFFLQ8WZ73 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
RFFLQ8WZ73 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
RFFLQ8WZ73 Y_RNA.661-201ENST00000516003 99 ntBASIC1.87□□□□□ -2.11
RFFLQ8WZ73 RNU7-99P-201ENST00000516271 62 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms