Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.96□□□□□ -2.26
SCN4AP35499 RPL26P26-201ENST00000480251 434 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 Y_RNA.655-201ENST00000515919 96 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.96□□□□□ -2.26
SCN4AP35499 AL442163.3-201ENST00000554110 156 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.96□□□□□ -2.26
SCN4AP35499 AC146944.4-201ENST00000602697 718 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AL109933.3-201ENST00000619095 188 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 Y_RNA.3-201ENST00000362331 103 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 Y_RNA.339-201ENST00000365325 102 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 RNU6-1145P-201ENST00000384246 107 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SCN4AP35499 AC074085.1-201ENST00000413598 418 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.96□□□□□ -2.26
SCN4AP35499 MRPS10P2-201ENST00000431226 381 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 MTND4P18-201ENST00000447010 465 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 RNU2-34P-201ENST00000516534 121 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AC027288.2-201ENST00000553028 243 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.96□□□□□ -2.26
SCN4AP35499 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SCN4AP35499 Y_RNA.287-201ENST00000364853 94 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 RNU4-12P-201ENST00000365233 139 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 RNU6-842P-201ENST00000384269 107 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 MIR1253-201ENST00000408273 105 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 MIR2355-201ENST00000517199 87 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 AF235103.2-201ENST00000525753 346 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 MIR3942-201ENST00000585264 109 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 MIR6128-201ENST00000615528 109 ntBASIC0.95□□□□□ -2.26
SCN4AP35499 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.95□□□□□ -2.26
SCN4AP35499 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SCN4AP35499 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.95□□□□□ -2.26
SCN4AP35499 SNORD50.1-201ENST00000362987 71 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 RNU6-1252P-201ENST00000363054 104 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 RNU6-727P-201ENST00000363592 107 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 Y_RNA.458-201ENST00000384240 102 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 MTCYBP10-201ENST00000424905 650 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 CST2P1-201ENST00000425770 87 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN4AP35499 AL606517.2-201ENST00000442855 241 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 RNU6-1041P-201ENST00000516254 102 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 RNU6-856P-201ENST00000516959 98 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 RNU6-58P-201ENST00000517143 103 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SCN4AP35499 MIR8065-201ENST00000620577 100 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AC092794.2-201ENST00000620933 563 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 MIR153-2-201ENST00000385225 87 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 MIR1197-201ENST00000408818 88 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 RNU6-1186P-201ENST00000410429 97 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 Y_RNA.615-201ENST00000410769 117 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 COX6CP10-201ENST00000416832 224 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 USP9YP30-201ENST00000430729 455 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AC245047.4-201ENST00000433189 144 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 HSPE1P9-201ENST00000440046 311 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 UBE2V1P7-201ENST00000446395 340 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AC011352.1-201ENST00000512300 793 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 CYCSP23-201ENST00000519781 313 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AC024995.1-201ENST00000523014 93 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AC004584.2-201ENST00000570407 410 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AL162424.1-201ENST00000602325 221 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 AC090517.2-201ENST00000614966 680 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.94□□□□□ -2.26
SCN4AP35499 AC008163.1-202ENST00000636004 2889 ntBASIC0.94□□□□□ -2.26
SCN4AP35499 MIR26B-201ENST00000362251 77 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 RPL30P16-201ENST00000419341 429 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AC004386.2-201ENST00000441858 148 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.93□□□□□ -2.26
SCN4AP35499 RPL30P10-201ENST00000488148 337 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 RNU6-911P-201ENST00000516523 104 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 RNU6-358P-201ENST00000516564 75 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 RNA5SP454-201ENST00000517231 127 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 APOOP3-201ENST00000536787 586 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AC022432.1-201ENST00000595739 310 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AC018462.2-201ENST00000605375 395 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 SNORD11B-201ENST00000607707 90 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AC093913.1-201ENST00000614178 329 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 AC126177.8-201ENST00000618339 1015 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 ZNF299P-201ENST00000406845 1804 ntBASIC0.93□□□□□ -2.26
SCN4AP35499 Y_RNA.135-201ENST00000363439 95 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 RNU6-595P-201ENST00000363944 107 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 RNU6-593P-201ENST00000364716 112 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 Y_RNA.516-201ENST00000384541 124 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 RNA5SP475-201ENST00000410568 110 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 ELOCP21-201ENST00000412558 336 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AL590632.1-201ENST00000424289 371 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 PGBD4P5-201ENST00000445958 426 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AC074290.1-201ENST00000448883 135 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 RNU6-718P-201ENST00000516166 105 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 RNU6-273P-201ENST00000516937 96 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AC105029.1-201ENST00000520250 669 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 DEFB131C-201ENST00000528817 165 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AL121579.1-201ENST00000555129 305 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AC018638.8-201ENST00000588755 281 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AC097065.2-201ENST00000608159 533 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms