Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 EIF4EP2-201ENST00000422816 654 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 RPEP5-201ENST00000441137 268 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 DAP3P1-201ENST00000441522 278 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 RNU6-1037P-201ENST00000459571 107 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 Y_RNA.700-201ENST00000516806 100 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 RNU6-255P-201ENST00000516957 105 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.17□□□□□ -2.06
HOXC13P31276 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXC13P31276 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXC13P31276 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
HOXC13P31276 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 MIR7111-201ENST00000619751 72 ntBASIC2.17□□□□□ -2.06
HOXC13P31276 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXC13P31276 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXC13P31276 AC092268.1-201ENST00000342691 405 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 RNU4-15P-201ENST00000362613 141 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 snoU2_19.2-201ENST00000363024 80 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 RNU6-1317P-201ENST00000364582 104 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 SNORD32A-201ENST00000364805 84 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 SNORA8-201ENST00000384574 139 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 MIR521-1-201ENST00000384902 87 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 RNU6-493P-201ENST00000391321 108 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 MIR548I2-201ENST00000408348 149 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 AL445646.1-201ENST00000431784 216 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXC13P31276 AC145146.1-201ENST00000496370 254 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 AC016632.1-201ENST00000503994 196 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXC13P31276 SCARNA24.2-201ENST00000516968 130 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 MIR3923-201ENST00000579521 83 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 CPDP1-201ENST00000579660 283 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 AC127459.3-201ENST00000624328 466 ntBASIC2.16□□□□□ -2.06
HOXC13P31276 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
HOXC13P31276 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 Y_RNA.16-201ENST00000362421 102 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 RNU6-700P-201ENST00000391043 107 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 BTF3L4P2-201ENST00000392798 346 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 PCNPP3-201ENST00000393579 471 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 Y_RNA.592-201ENST00000410274 109 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 RNA5SP494-201ENST00000410653 129 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 Y_RNA.793-201ENST00000411222 111 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 AC007098.1-201ENST00000420122 367 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 RPL9P9-202ENST00000466501 579 ntBASIC2.15□□□□□ -2.07
HOXC13P31276 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXC13P31276 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXC13P31276 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HOXC13P31276 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXC13P31276 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXC13P31276 RNU6-545P-201ENST00000362681 104 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 RNU1-76P-201ENST00000362903 159 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 Y_RNA.200-201ENST00000364018 102 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 Y_RNA.291-201ENST00000364886 113 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 Y_RNA.352-201ENST00000365439 102 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 Y_RNA.458-201ENST00000384240 102 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 RNU6-662P-201ENST00000384253 104 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 MIR1298-201ENST00000408783 112 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 RNU2-20P-201ENST00000410425 191 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXC13P31276 AL138752.1-201ENST00000452964 351 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 AC132942.1-201ENST00000486753 483 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXC13P31276 AC107393.1-201ENST00000512403 346 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 RNU4-71P-201ENST00000516258 113 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 Y_RNA.713-201ENST00000517013 96 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 SNORA44.1-201ENST00000517031 108 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 MIR1248-201ENST00000629190 106 ntBASIC2.14□□□□□ -2.07
HOXC13P31276 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXC13P31276 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.13□□□□□ -2.07
HOXC13P31276 ZNF299P-201ENST00000406845 1804 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR335-201ENST00000362173 94 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 RNU6-1266P-201ENST00000362794 105 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 Y_RNA.83-201ENST00000363005 113 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 Y_RNA.143-201ENST00000363520 106 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 RNU6-595P-201ENST00000363944 107 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 Y_RNA.504-201ENST00000384481 104 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 Y_RNA.506-201ENST00000384494 102 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 RNU6-125P-201ENST00000384505 107 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HOXC13P31276 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HOXC13P31276 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR1262-201ENST00000408276 93 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 RPL23AP95-201ENST00000426806 265 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 AC003989.2-201ENST00000440224 169 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 Y_RNA.644-201ENST00000459006 113 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 AC010469.2-201ENST00000496412 480 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 Y_RNA.674-201ENST00000516362 113 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 RNU6-911P-201ENST00000516523 104 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 SNORA31.16-201ENST00000516773 139 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 AC087441.2-201ENST00000529141 262 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC13P31276 AC136932.1-201ENST00000574771 208 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR4643-201ENST00000577473 78 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR5701-3-201ENST00000578890 82 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms