Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 PRR13P7-201ENST00000605538 430 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC100812.1-201ENST00000607622 580 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC138305.3-201ENST00000624988 240 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC068205.3-201ENST00000636385 468 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL159152.1-201ENST00000635019 2587 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-112P-201ENST00000363599 104 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.287-201ENST00000364853 94 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.387-201ENST00000383918 102 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1026P-201ENST00000384465 108 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 RPL21P1-201ENST00000399532 476 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1001P-201ENST00000411265 100 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 MRPS18CP6-201ENST00000423587 223 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 CHEK2P4-201ENST00000450340 246 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 NDUFB4P10-201ENST00000452541 359 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.632-201ENST00000459189 102 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC025647.1-201ENST00000517879 253 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AP002001.1-203ENST00000534002 267 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 RAB11AP2-201ENST00000545905 639 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC090617.3-201ENST00000573670 475 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNORA4-201ENST00000584302 138 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC005899.2-201ENST00000584353 90 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC136443.5-201ENST00000603741 370 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL078603.1-201ENST00000603824 313 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC103810.8-201ENST00000607347 118 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNORD11B-201ENST00000607707 90 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL353149.1-201ENST00000610667 244 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC130454.1-201ENST00000622948 401 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC091925.1-201ENST00000623204 462 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR338-201ENST00000636369 67 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 U6.108-201ENST00000637764 58 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR1302-1-201ENST00000637932 143 ntBASIC1.25□□□□□ -2.21
TMX2-CTNND1H3BSU7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNA5SP361-201ENST00000362686 118 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-862P-201ENST00000362804 105 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.132-201ENST00000363421 102 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-727P-201ENST00000363592 107 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-793P-201ENST00000384233 104 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNY4P36-201ENST00000391116 96 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR1185-2-201ENST00000408687 86 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MTCYBP10-201ENST00000424905 650 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 HMGN2P34-201ENST00000437647 269 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU7-57P-201ENST00000459540 60 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-221P-201ENST00000459541 99 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC022493.2-201ENST00000506122 481 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC011406.1-201ENST00000512440 370 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-470P-201ENST00000515954 104 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-948P-201ENST00000516374 107 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU2-34P-201ENST00000516534 121 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.706-201ENST00000516933 99 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC091144.1-201ENST00000519573 138 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR5695-201ENST00000579717 85 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR5690-201ENST00000583739 73 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR1244-1-201ENST00000612829 85 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 PISRT1.1-201ENST00000616930 107 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC126177.8-201ENST00000618339 1015 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR1244-3-201ENST00000635744 85 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR1244-2-201ENST00000636449 85 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR1244-4-202ENST00000636813 85 ntBASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
TMX2-CTNND1H3BSU7 U3.8-201ENST00000363675 217 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.179-201ENST00000363844 90 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-280P-201ENST00000364145 104 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.358-201ENST00000365491 99 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.496-201ENST00000384444 101 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-541P-201ENST00000384709 110 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1009P-201ENST00000390996 107 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 MTCYBP4-201ENST00000401524 249 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 USP9YP16-201ENST00000430287 407 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 USP9YP23-201ENST00000455085 407 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNORD19B-201ENST00000459623 84 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU1-117P-201ENST00000517041 158 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 SUMO2P18-201ENST00000518873 252 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC093023.1-201ENST00000547375 507 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC004584.2-201ENST00000570407 410 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR4753-201ENST00000585119 83 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC010999.1-201ENST00000611856 324 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC083806.3-201ENST00000614016 455 ntBASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.23□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1301P-201ENST00000362724 104 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU4-79P-201ENST00000362764 141 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.58-201ENST00000362807 102 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.154-201ENST00000363624 102 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNY3P1-201ENST00000365085 102 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNY3-201ENST00000365484 102 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1297P-201ENST00000384415 104 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.577-201ENST00000384794 101 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms