Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB11Q9Y5F2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB11Q9Y5F2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB11Q9Y5F2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 RNU6-1292P-201ENST00000383856 107 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 SNORA1-201ENST00000384107 130 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 MIR199A2-201ENST00000385289 110 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 MIR1253-201ENST00000408273 105 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 RNU2-32P-201ENST00000411193 191 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 AC093578.1-201ENST00000415219 368 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 SNORA70.24-201ENST00000517233 118 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 MIR5582-201ENST00000579697 68 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 MIR3129-201ENST00000581095 76 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 AC007179.3-201ENST00000604976 235 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 AC012531.5-201ENST00000611375 151 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 MIR7157-201ENST00000635801 60 ntBASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PCDHB11Q9Y5F2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 AC123900.1-201ENST00000420390 96 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 U3.44-201ENST00000458938 192 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 AC110768.1-201ENST00000509222 400 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 MRPS17P9-201ENST00000511924 393 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 PHBP14-201ENST00000512887 367 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 MIR4644-201ENST00000579929 84 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 U3.45-201ENST00000607547 219 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 FAM35DP-201ENST00000323387 2712 ntBASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHB11Q9Y5F2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 RNU1-96P-201ENST00000364163 162 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 Y_RNA.281-201ENST00000364774 94 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 Y_RNA.332-201ENST00000365271 113 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 AL031121.1-201ENST00000406553 254 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 MIR1263-201ENST00000408324 86 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 Y_RNA.621-201ENST00000411065 96 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 AC093259.1-201ENST00000509755 300 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 SNORA70.14-201ENST00000516205 110 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 RNU6-412P-201ENST00000516434 106 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 SCARNA3-201ENST00000517097 143 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 AC073413.2-201ENST00000604332 360 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB11Q9Y5F2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHB11Q9Y5F2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.71□□□□□ -1.81
PCDHB11Q9Y5F2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
PCDHB11Q9Y5F2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 SNORD24-201ENST00000383884 75 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 MIR491-201ENST00000384877 84 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 AL035423.1-201ENST00000420331 213 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 AC002075.2-201ENST00000425207 252 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 RN7SL93P-201ENST00000463035 293 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 HMGN1P7-201ENST00000491722 313 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 AC087499.8-201ENST00000578406 226 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 AC107294.3-201ENST00000609211 526 ntBASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PCDHB11Q9Y5F2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 MAPK10-322ENST00000641485 4530 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 RNU6-888P-201ENST00000363010 101 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 RNU6-106P-201ENST00000384405 107 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 MIR218-1-201ENST00000384999 110 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 RN7SKP18-201ENST00000516005 275 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 Y_RNA.677-201ENST00000516401 85 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 RNU6-113P-201ENST00000516653 101 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 AC073346.2-201ENST00000624724 2058 ntBASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PCDHB11Q9Y5F2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PCDHB11Q9Y5F2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PCDHB11Q9Y5F2 MIR340-201ENST00000362125 95 ntBASIC3.69□□□□□ -1.82
PCDHB11Q9Y5F2 RNU6-743P-201ENST00000364151 106 ntBASIC3.69□□□□□ -1.82
PCDHB11Q9Y5F2 Y_RNA.369-201ENST00000365568 117 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms