Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 RN7SKP282-201ENST00000516824 299 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 MIR3609-201ENST00000582661 80 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
MBD1Q9UIS9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD1Q9UIS9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD1Q9UIS9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD1Q9UIS9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MBD1Q9UIS9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MBD1Q9UIS9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 SNORD114-19-201ENST00000363072 75 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 RNU6-1144P-201ENST00000384247 104 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 RNU4-43P-201ENST00000410628 137 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 SRIP1-201ENST00000489235 288 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 Y_RNA.709-201ENST00000516952 92 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 AL670379.2-201ENST00000604983 252 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 AL138880.2-201ENST00000616214 239 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.17□□□□□ -1.9
MBD1Q9UIS9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
MBD1Q9UIS9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MBD1Q9UIS9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
MBD1Q9UIS9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.16□□□□□ -1.9
MBD1Q9UIS9 U8.7-201ENST00000364940 136 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 RNY3P5-201ENST00000384127 102 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 MIR548B-201ENST00000385247 97 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 HSPE1P21-201ENST00000438283 308 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.16□□□□□ -1.9
MBD1Q9UIS9 RPS3P1-201ENST00000456781 192 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 AL441985.1-201ENST00000457727 251 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 snoU13.28-201ENST00000459235 104 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD1Q9UIS9 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 MIR548AY-201ENST00000617669 107 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 CENPCP1-201ENST00000533085 2578 ntBASIC3.16□□□□□ -1.9
MBD1Q9UIS9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
MBD1Q9UIS9 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD1Q9UIS9 AL357134.1-201ENST00000445848 426 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.15□□□□□ -1.91
MBD1Q9UIS9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD1Q9UIS9 AC117454.1-201ENST00000491120 168 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.15□□□□□ -1.91
MBD1Q9UIS9 RNU7-115P-201ENST00000516433 55 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 RNA5SP170-201ENST00000517150 101 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 AC104027.1-201ENST00000521887 300 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 AC013412.1-201ENST00000610687 192 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 uc_338.25-201ENST00000613756 156 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.91
MBD1Q9UIS9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 RNU6-755P-201ENST00000364400 103 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AL158823.1-201ENST00000418441 478 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 HMGN1P18-201ENST00000457642 277 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC016925.1-201ENST00000458303 298 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 RNA5SP356-201ENST00000515972 94 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 HSPE1P18-201ENST00000517602 280 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 MTND5P34-201ENST00000568888 325 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC068647.2-201ENST00000637380 353 ntBASIC3.14□□□□□ -1.91
MBD1Q9UIS9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD1Q9UIS9 AC069528.2-201ENST00000624849 1991 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.13□□□□□ -1.91
MBD1Q9UIS9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MBD1Q9UIS9 SNORD45.3-201ENST00000363836 72 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 SNORA71.1-201ENST00000364523 117 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 RNU6-1082P-201ENST00000364574 107 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 RNU6-597P-201ENST00000365620 102 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 MIR147B-201ENST00000390185 80 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
MBD1Q9UIS9 SNORA36B-201ENST00000410438 131 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 RNU2-49P-201ENST00000410666 184 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 CYCSP49-201ENST00000420810 319 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 RNU6-589P-201ENST00000516485 107 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 AC090142.3-201ENST00000519012 385 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 GTF3AP2-201ENST00000557014 266 ntBASIC3.13□□□□□ -1.91
MBD1Q9UIS9 MIR4679-2-201ENST00000578358 77 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 238.1 ms