Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC007014.2-201ENST00000615581 479 ntBASIC0.09□□□□□ -2.4
RIMBP3Q9UFD9 AC100810.6-201ENST00000638068 285 ntBASIC0.09□□□□□ -2.4
RIMBP3Q9UFD9 AC006927.3-201ENST00000638789 384 ntBASIC0.09□□□□□ -2.4
RIMBP3Q9UFD9 RNU5B-2P-201ENST00000363036 113 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 Y_RNA.265-201ENST00000364677 108 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 Y_RNA.551-201ENST00000384661 102 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 MIR454-201ENST00000390180 115 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 SNORD111-201ENST00000408139 94 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 RNU4-46P-201ENST00000410818 138 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 AC079781.2-201ENST00000446424 169 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 TPT1P7-201ENST00000458300 517 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-344P-201ENST00000516635 111 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 RNU7-28P-201ENST00000516759 62 ntBASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.08□□□□□ -2.4
RIMBP3Q9UFD9 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 SNORD49B-201ENST00000365172 72 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 CALM2P4-201ENST00000430810 426 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 Vault.3-201ENST00000516676 95 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-410P-201ENST00000517006 107 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AL158211.1-201ENST00000566763 763 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AC018714.1-201ENST00000605028 208 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AL162730.1-201ENST00000605734 292 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 uc_338.6-201ENST00000613544 171 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 AL390237.1-201ENST00000404226 1415 ntBASIC0.07□□□□□ -2.4
RIMBP3Q9UFD9 RNU5F-6P-201ENST00000362979 116 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-46P-201ENST00000383860 107 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 SNORD105-201ENST00000386910 85 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AL663109.1-201ENST00000411498 844 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-1037P-201ENST00000459571 107 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AP003716.2-201ENST00000528260 108 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 MIR4509-3-201ENST00000578671 94 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 MIR4509-2-201ENST00000583920 94 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 BNIP3P39-201ENST00000601077 554 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AC068790.2-201ENST00000602601 557 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AP000811.1-201ENST00000603803 651 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 RNU4-5P-201ENST00000607255 135 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 AL157392.4-201ENST00000609756 345 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 MIR4509-1-201ENST00000618224 94 ntBASIC0.06□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-227P-201ENST00000362865 103 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-266P-201ENST00000364225 107 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-1127P-201ENST00000384580 107 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-1184P-201ENST00000384588 108 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 MIR1185-2-201ENST00000408687 86 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 SCARNA18-201ENST00000459004 134 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 EIF1P4-201ENST00000572664 335 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 Y_RNA.367-201ENST00000365544 101 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 MIR140-201ENST00000385282 100 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AC104850.1-201ENST00000435940 476 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 RPS29P27-201ENST00000463711 170 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 SNORD111.1-201ENST00000516421 86 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 MTCO3P23-201ENST00000561363 289 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 FGF7P1-201ENST00000582820 288 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AL117336.2-201ENST00000602435 335 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-85P-201ENST00000605989 107 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AC091304.9-201ENST00000612091 226 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 AC122133.1-201ENST00000613964 233 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 MIR198-201ENST00000637333 62 ntBASIC0.05□□□□□ -2.4
RIMBP3Q9UFD9 SNORD115-41-201ENST00000363608 82 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 RNU5E-5P-201ENST00000365379 116 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 MIR1-2-201ENST00000384961 85 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 Y_RNA.598-201ENST00000410480 95 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-177P-201ENST00000411257 104 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 GPR143P-201ENST00000434155 205 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 GMFBP1-201ENST00000467831 427 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 AP000870.1-201ENST00000472927 406 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 AC091133.4-201ENST00000511142 308 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-1096P-201ENST00000517089 102 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 AF235103.2-201ENST00000525753 346 ntBASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
RIMBP3Q9UFD9 MIR103A1-201ENST00000362165 78 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-1286P-201ENST00000383871 107 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 RNU6-74P-201ENST00000384235 107 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 RNA5SP219-201ENST00000390940 113 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 MIR1185-1-201ENST00000408598 86 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 USP9YP12-201ENST00000450481 570 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 NDUFB4P10-201ENST00000452541 359 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 MTCO2P18-201ENST00000457151 658 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 AP001372.4-201ENST00000524889 472 ntBASIC0.03□□□□□ -2.4
RIMBP3Q9UFD9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 954.3 ms