Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC016909.1-201ENST00000415916 166 ntBASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 DLEU2_5.2-201ENST00000610606 84 ntBASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC61Q9Y6R9 AC010889.1-201ENST00000566193 2666 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 RNU6-509P-201ENST00000363519 107 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 RNA5SP72-201ENST00000364442 117 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 SNORD31B-201ENST00000364977 69 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 MIR548O-201ENST00000408583 114 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 RNU4-69P-201ENST00000410677 143 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 AC023141.4-201ENST00000412031 328 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 AC099677.2-201ENST00000436385 175 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 MIR449C-201ENST00000516047 92 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 SNORA62.6-201ENST00000606322 83 ntBASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC61Q9Y6R9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.21□□□□□ -1.57
CCDC61Q9Y6R9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CCDC61Q9Y6R9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 RNU7-80P-201ENST00000459562 61 ntBASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 AC010401.1-201ENST00000463867 348 ntBASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 AC025554.1-201ENST00000505641 188 ntBASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 RNA5SP468-201ENST00000516782 93 ntBASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 AC064859.1-201ENST00000624741 174 ntBASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 AL049781.1-201ENST00000623195 3585 ntBASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC61Q9Y6R9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.191-201ENST00000363972 113 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 SNORA71B-202ENST00000439232 272 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 IGHVII-40-1-201ENST00000517316 58 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.773-201ENST00000607168 90 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 AC073346.2-201ENST00000624724 2058 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 FAM35DP-201ENST00000323387 2712 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 ZNF271P-202ENST00000465539 1970 ntBASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC61Q9Y6R9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 RNU1-96P-201ENST00000364163 162 ntBASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 RNU6-234P-201ENST00000365229 104 ntBASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.377-201ENST00000365644 108 ntBASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.467-201ENST00000384297 102 ntBASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 RAC1P2-201ENST00000511164 579 ntBASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 SCGB1D5P-201ENST00000515134 247 ntBASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC61Q9Y6R9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 RNU2-40P-201ENST00000410833 196 ntBASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 CYCSP4-201ENST00000429682 331 ntBASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 SNORD105B-201ENST00000458770 79 ntBASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 RNU2-34P-201ENST00000516534 121 ntBASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 MIR3200-201ENST00000580767 85 ntBASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 AC145423.2-201ENST00000610631 239 ntBASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC61Q9Y6R9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 SNORD115-28-201ENST00000363931 81 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 Y_RNA.351-201ENST00000365436 96 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 RNVU1-14-201ENST00000384770 164 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 MIR491-201ENST00000384877 84 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 MIR218-2-201ENST00000385006 110 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 RNU11-5P-201ENST00000391216 129 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 HMGN2P21-201ENST00000447764 270 ntBASIC5.17□□□□□ -1.58
CCDC61Q9Y6R9 AC233266.1-201ENST00000454518 96 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 341.6 ms