Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC026470.2-201ENST00000561492 181 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC122108.2-201ENST00000611946 526 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 TCL6_2.1-201ENST00000615162 119 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC005562.2-201ENST00000618264 111 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC009248.2-201ENST00000619826 254 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXC2Q99958 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
FOXC2Q99958 MTND4P5-201ENST00000435821 1374 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
FOXC2Q99958 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 Y_RNA.132-201ENST00000363421 102 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 SNORA63D-201ENST00000364359 132 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 RNU6-842P-201ENST00000384269 107 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 RNU6-510P-201ENST00000391239 108 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 MIR548K-201ENST00000408406 116 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC004386.2-201ENST00000441858 148 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 MTCO3P8-201ENST00000453691 755 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 HMGN2P9-201ENST00000476875 229 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.16□□□□□ -2.22
FOXC2Q99958 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.16□□□□□ -2.22
FOXC2Q99958 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.16□□□□□ -2.22
FOXC2Q99958 AC084364.2-201ENST00000546924 395 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC005668.1-201ENST00000571142 476 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 MIR4742-201ENST00000581069 85 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 POLR3GP2-201ENST00000588366 668 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC011712.1-201ENST00000588959 234 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC084782.3-201ENST00000612282 578 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC137590.2-201ENST00000619709 240 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
FOXC2Q99958 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.16□□□□□ -2.22
FOXC2Q99958 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
FOXC2Q99958 MTND5P10-201ENST00000603719 1809 ntBASIC1.15□□□□□ -2.22
FOXC2Q99958 RNU6-545P-201ENST00000362681 104 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU6-137P-201ENST00000363680 108 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU4-9P-201ENST00000364951 139 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU6-1013P-201ENST00000384180 107 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU6-17P-201ENST00000384245 107 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU6-18P-201ENST00000384527 107 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 MIR549A-201ENST00000385268 96 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
FOXC2Q99958 AL117342.1-201ENST00000404861 406 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 MTND3P8-201ENST00000412909 339 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.15□□□□□ -2.23
FOXC2Q99958 SDAD1P3-201ENST00000427380 333 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 AC027119.1-201ENST00000440877 241 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.15□□□□□ -2.23
FOXC2Q99958 AC009237.7-201ENST00000447357 229 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 snoU13.30-201ENST00000458951 104 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 COX6CP14-201ENST00000469580 174 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.15□□□□□ -2.23
FOXC2Q99958 AC079140.2-201ENST00000506193 142 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU6-856P-201ENST00000516959 98 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.15□□□□□ -2.23
FOXC2Q99958 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.15□□□□□ -2.23
FOXC2Q99958 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.15□□□□□ -2.23
FOXC2Q99958 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.15□□□□□ -2.23
FOXC2Q99958 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
FOXC2Q99958 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.15□□□□□ -2.23
FOXC2Q99958 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
FOXC2Q99958 RNU1-62P-201ENST00000362599 164 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 Y_RNA.72-201ENST00000362894 103 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU6-1059P-201ENST00000363752 98 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU6-595P-201ENST00000363944 107 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU1-96P-201ENST00000364163 162 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 Y_RNA.248-201ENST00000364501 109 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 Y_RNA.279-201ENST00000364763 95 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU6-790P-201ENST00000384479 105 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR548B-201ENST00000385247 97 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR300-201ENST00000401138 83 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.14□□□□□ -2.23
FOXC2Q99958 AL356776.1-201ENST00000406574 447 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR1283-1-201ENST00000408494 87 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNA5SP504-201ENST00000410676 117 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AL161935.2-201ENST00000414627 60 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AC007098.1-201ENST00000420122 367 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 USP9YP30-201ENST00000430729 455 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MTCO3P29-201ENST00000432119 779 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.14□□□□□ -2.23
FOXC2Q99958 FO393415.2-201ENST00000480085 343 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RPL30P10-201ENST00000488148 337 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AC082651.2-201ENST00000496833 166 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AC026782.1-201ENST00000512952 449 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 ACA59.1-201ENST00000515966 143 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU6-344P-201ENST00000516635 111 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 RNU6-58P-201ENST00000517143 103 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.14□□□□□ -2.23
FOXC2Q99958 AC027288.2-201ENST00000553028 243 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR5701-3-201ENST00000578890 82 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR5701-1-201ENST00000585138 82 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR5701-2-201ENST00000615634 82 ntBASIC1.14□□□□□ -2.23
FOXC2Q99958 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 Y_RNA.205-201ENST00000364128 113 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 RNU6-245P-201ENST00000384020 107 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 RNU6-975P-201ENST00000384296 105 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 502.3 ms