Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
PNKPQ96T60 AC091959.1-201ENST00000495857 238 ntBASIC2.75□□□□□ -1.97
PNKPQ96T60 RNU6-1098P-201ENST00000516772 96 ntBASIC2.75□□□□□ -1.97
PNKPQ96T60 MIR3945-201ENST00000581853 98 ntBASIC2.75□□□□□ -1.97
PNKPQ96T60 AL713866.2-201ENST00000603579 219 ntBASIC2.75□□□□□ -1.97
PNKPQ96T60 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
PNKPQ96T60 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PNKPQ96T60 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PNKPQ96T60 AC092435.3-201ENST00000565538 3654 ntBASIC2.75□□□□□ -1.97
PNKPQ96T60 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PNKPQ96T60 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PNKPQ96T60 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PNKPQ96T60 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PNKPQ96T60 Y_RNA.117-201ENST00000363294 101 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 Y_RNA.274-201ENST00000364714 101 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 RNU6-514P-201ENST00000384208 107 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 RNU6-1274P-201ENST00000384557 107 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.74□□□□□ -1.97
PNKPQ96T60 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.74□□□□□ -1.97
PNKPQ96T60 AC090515.1-201ENST00000465295 476 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 RNA5SP148-201ENST00000516527 94 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 MIR3199-1-201ENST00000582434 88 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.74□□□□□ -1.97
PNKPQ96T60 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.74□□□□□ -1.97
PNKPQ96T60 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.74□□□□□ -1.97
PNKPQ96T60 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.74□□□□□ -1.97
PNKPQ96T60 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PNKPQ96T60 Y_RNA.136-201ENST00000363444 102 ntBASIC2.73□□□□□ -1.97
PNKPQ96T60 RNU6-1264P-201ENST00000383891 107 ntBASIC2.73□□□□□ -1.97
PNKPQ96T60 RNU2-54P-201ENST00000410299 190 ntBASIC2.73□□□□□ -1.97
PNKPQ96T60 AL139156.1-201ENST00000412785 841 ntBASIC2.73□□□□□ -1.97
PNKPQ96T60 AC009963.1-201ENST00000417265 157 ntBASIC2.73□□□□□ -1.97
PNKPQ96T60 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.73□□□□□ -1.97
PNKPQ96T60 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
PNKPQ96T60 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
PNKPQ96T60 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 RNU4-80P-201ENST00000363200 141 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 Y_RNA.200-201ENST00000364018 102 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 Y_RNA.275-201ENST00000364726 110 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 Y_RNA.297-201ENST00000364950 91 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PNKPQ96T60 MIR1298-201ENST00000408783 112 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.72□□□□□ -1.97
PNKPQ96T60 RPS12P2-201ENST00000439728 269 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 SEM1P1-201ENST00000506694 209 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.72□□□□□ -1.97
PNKPQ96T60 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 SNORA27.4-201ENST00000516650 95 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 SCARNA3-201ENST00000517097 143 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.72□□□□□ -1.97
PNKPQ96T60 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.72□□□□□ -1.97
PNKPQ96T60 AL162424.1-201ENST00000602325 221 ntBASIC2.72□□□□□ -1.97
PNKPQ96T60 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PNKPQ96T60 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PNKPQ96T60 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.71□□□□□ -1.97
PNKPQ96T60 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PNKPQ96T60 Y_RNA.122-201ENST00000363331 96 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 RNU6-1305P-201ENST00000364353 104 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PNKPQ96T60 RNU6-662P-201ENST00000384253 104 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 MIR548B-201ENST00000385247 97 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 SNORD116-28-201ENST00000516123 91 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 RNU2-12P-201ENST00000517216 168 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 RNU6-586P-201ENST00000517265 104 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 DEFB117-201ENST00000602356 141 ntBASIC2.71□□□□□ -1.98
PNKPQ96T60 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.71□□□□□ -1.98
PNKPQ96T60 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.71□□□□□ -1.98
PNKPQ96T60 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.71□□□□□ -1.98
PNKPQ96T60 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.71□□□□□ -1.98
PNKPQ96T60 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 UBE2WP1-201ENST00000362030 340 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 RNU6-545P-201ENST00000362681 104 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 Y_RNA.329-201ENST00000365209 107 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 RNU6-1289P-201ENST00000384431 106 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PNKPQ96T60 MIR1294-201ENST00000408503 142 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.7□□□□□ -1.98
PNKPQ96T60 OOSP1P1-201ENST00000423265 274 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.7□□□□□ -1.98
PNKPQ96T60 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
PNKPQ96T60 SNORA31.11-201ENST00000516528 139 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 SNORA81.3-201ENST00000517283 198 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 AC091544.4-201ENST00000555268 342 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 AL512605.2-201ENST00000592972 256 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 AC006380.1-201ENST00000603598 186 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.7□□□□□ -1.98
PNKPQ96T60 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PNKPQ96T60 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
PNKPQ96T60 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
PNKPQ96T60 AC010329.5-201ENST00000623497 2174 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 RNU6-324P-201ENST00000363957 106 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 Y_RNA.199-201ENST00000364014 102 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 Y_RNA.785-201ENST00000384290 109 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 MIR548I3-201ENST00000408378 149 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 U6atac.2-201ENST00000408644 118 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 MIR548I1-201ENST00000408810 149 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms