Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 AC130454.1-201ENST00000622948 401 ntBASIC2.58□□□□□ -2
TRIM43Q96BQ3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM43Q96BQ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM43Q96BQ3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM43Q96BQ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM43Q96BQ3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 Y_RNA.149-201ENST00000363558 117 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 Y_RNA.176-201ENST00000363815 109 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 SNORA72.2-201ENST00000365028 127 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 RNU6-1105P-201ENST00000384774 107 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 MIR548F4-201ENST00000408515 105 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 ELOCP21-201ENST00000412558 336 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 AL358176.2-201ENST00000425769 204 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 RAB28P5-201ENST00000427490 651 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 TOMM22P2-201ENST00000430735 237 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 AC093259.1-201ENST00000509755 300 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.57□□□□□ -2
TRIM43Q96BQ3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.57□□□□□ -2
TRIM43Q96BQ3 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.57□□□□□ -2
TRIM43Q96BQ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.57□□□□□ -2
TRIM43Q96BQ3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM43Q96BQ3 RNU6-626P-201ENST00000363354 107 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 RNU6-961P-201ENST00000363893 105 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 RNU6-770P-201ENST00000363929 105 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 RNU6-713P-201ENST00000384761 107 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 RNA5SP475-201ENST00000410568 110 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 SRIP3-201ENST00000413200 219 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.56□□□□□ -2
TRIM43Q96BQ3 MTND3P2-201ENST00000438452 342 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
TRIM43Q96BQ3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
TRIM43Q96BQ3 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 AC005176.2-201ENST00000596933 147 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
TRIM43Q96BQ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM43Q96BQ3 Y_RNA.19-201ENST00000362462 99 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 Y_RNA.214-201ENST00000364201 112 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 RNU6-20P-201ENST00000384106 107 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 AC123900.1-201ENST00000420390 96 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 AC005002.2-201ENST00000438228 269 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 RNU7-57P-201ENST00000459540 60 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 AK6P2-201ENST00000549020 471 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 AC026271.5-201ENST00000577873 130 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 AP000942.3-201ENST00000603702 160 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 MIR376A1-201ENST00000616574 68 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 MIR3674-201ENST00000636576 68 ntBASIC2.55□□□□□ -2
TRIM43Q96BQ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRIM43Q96BQ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRIM43Q96BQ3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM43Q96BQ3 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TRIM43Q96BQ3 RNU6-238P-201ENST00000363313 106 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 Y_RNA.574-201ENST00000384766 95 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 MIR181B1-201ENST00000385240 110 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 MIR548B-201ENST00000385247 97 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM43Q96BQ3 RPL21P1-201ENST00000399532 476 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 AL023284.1-201ENST00000403956 276 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM43Q96BQ3 AL390729.2-201ENST00000416137 156 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 AL731563.1-201ENST00000442202 214 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
TRIM43Q96BQ3 CYCSP26-201ENST00000534107 320 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 AL109918.3-201ENST00000603072 338 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
TRIM43Q96BQ3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TRIM43Q96BQ3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM43Q96BQ3 Y_RNA.133-201ENST00000363428 110 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 RNU6-975P-201ENST00000384296 105 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 RNU6-937P-201ENST00000384325 106 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 EDDM3CP-201ENST00000415977 425 ntBASIC2.53□□□□□ -2
TRIM43Q96BQ3 AC018634.1-201ENST00000437554 401 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms