Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RNU1-75P-201ENST00000347264 129 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 SNORA12-201ENST00000391162 147 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 SNORA75.5-201ENST00000391291 81 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 AL031003.1-201ENST00000404229 172 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 AL138878.1-201ENST00000405131 347 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 RPS29P24-201ENST00000486345 171 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.757-201ENST00000578934 114 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 UBL5P2-201ENST00000583788 219 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 UCA1.1-201ENST00000620952 75 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 AC017071.1-201ENST00000564407 2204 ntBASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 RNU6-1205P-201ENST00000363625 106 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 RNA5SP139-201ENST00000364340 117 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 RNU6-728P-201ENST00000365375 104 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 SNORA7.4-201ENST00000384249 137 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 MIR29B2-201ENST00000385055 81 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 MIR548A3-201ENST00000385297 97 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 MIR526A2-201ENST00000390198 65 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 RNU6-1228P-201ENST00000391014 107 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.584-201ENST00000391090 114 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 RNU6-383P-201ENST00000410864 94 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AL158147.1-201ENST00000443970 75 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 RNU7-141P-201ENST00000459304 62 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 MRPS36P2-201ENST00000512569 299 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC008885.1-201ENST00000514930 301 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC090142.3-201ENST00000519012 385 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AC090517.3-201ENST00000625170 141 ntBASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM40Q8WWA1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 U8.1-201ENST00000362843 134 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 RNU6-486P-201ENST00000363116 107 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.116-201ENST00000363292 103 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 SNORD115-30-201ENST00000364117 82 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 SNORA54-201ENST00000384281 123 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 SNORA44-201ENST00000384584 132 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 MIR548A1-201ENST00000385041 97 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 AL033523.1-201ENST00000605153 153 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 RPL17P51-201ENST00000605218 238 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 uc_338.28-201ENST00000612082 187 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 CENPCP1-201ENST00000533085 2578 ntBASIC3.5□□□□□ -1.85
TMEM40Q8WWA1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 U8.6-201ENST00000364939 135 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 RNU1-101P-201ENST00000391171 127 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 RNU6-855P-201ENST00000410395 104 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 RNA5SP504-201ENST00000410676 117 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 RNY4P29-201ENST00000410801 97 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.622-201ENST00000411091 108 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 TOMM22P2-201ENST00000430735 237 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 AL031737.1-201ENST00000450125 223 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 AC021205.2-201ENST00000480069 347 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 AC120024.3-201ENST00000603167 156 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 uc_338.25-201ENST00000613756 156 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 AC006386.2-201ENST00000624491 75 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 AC012005.1-201ENST00000624575 75 ntBASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.49□□□□□ -1.85
TMEM40Q8WWA1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.114-201ENST00000363265 113 ntBASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.280-201ENST00000364765 112 ntBASIC3.48□□□□□ -1.85
TMEM40Q8WWA1 Y_RNA.341-201ENST00000365341 102 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 404.9 ms