Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 SNORA75.4-201ENST00000391278 119 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 RNU1-139P-201ENST00000391307 165 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AL033519.2-201ENST00000403958 392 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 RNU4-14P-201ENST00000410858 122 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 NCOR1P3-201ENST00000420479 303 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AC098614.3-201ENST00000438957 440 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.69□□□□□ -2.14
SP9P0CG40 RNU6-717P-201ENST00000459076 104 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 MTND4P17-201ENST00000470444 350 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AC091179.3-201ENST00000474761 144 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 RNU6-1114P-201ENST00000516022 107 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 RNU1-40P-201ENST00000516816 164 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 RNU1-97P-201ENST00000516872 164 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AC105029.1-201ENST00000520250 669 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AL121579.1-201ENST00000555129 305 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.69□□□□□ -2.14
SP9P0CG40 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 PISRT1.1-201ENST00000616930 107 ntBASIC1.69□□□□□ -2.14
SP9P0CG40 AC131280.1-202ENST00000624067 4211 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 Y_RNA.106-201ENST00000363189 100 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 RNU6-60P-201ENST00000364792 103 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 RNU6-793P-201ENST00000384233 104 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 RNU6-331P-201ENST00000384724 107 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 MIR190B-201ENST00000401119 79 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.68□□□□□ -2.14
SP9P0CG40 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.68□□□□□ -2.14
SP9P0CG40 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.68□□□□□ -2.14
SP9P0CG40 RPL23AP7-203ENST00000449021 469 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 NDUFB4P10-201ENST00000452541 359 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 Y_RNA.635-201ENST00000459041 101 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.68□□□□□ -2.14
SP9P0CG40 AC093303.1-201ENST00000514549 295 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.68□□□□□ -2.14
SP9P0CG40 AK6P2-201ENST00000549020 471 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 AC005899.2-201ENST00000584353 90 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 AL355073.2-201ENST00000612106 557 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.68□□□□□ -2.14
SP9P0CG40 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 snoZ196.1-201ENST00000625269 89 ntBASIC1.68□□□□□ -2.14
SP9P0CG40 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.68□□□□□ -2.14
SP9P0CG40 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SP9P0CG40 RNU6-222P-201ENST00000362438 107 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 Y_RNA.179-201ENST00000363844 90 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 RNU1-96P-201ENST00000364163 162 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 SNORD87-201ENST00000364849 89 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 Y_RNA.415-201ENST00000384012 112 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 RNU6-281P-201ENST00000384212 103 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 MIR548B-201ENST00000385247 97 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SP9P0CG40 RNU6-700P-201ENST00000391043 107 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SP9P0CG40 RNU6-57P-201ENST00000411348 103 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 MTCYBP10-201ENST00000424905 650 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 USP9YP16-201ENST00000430287 407 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 AL353997.1-201ENST00000432936 108 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 AC245047.4-201ENST00000433189 144 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 USP9YP23-201ENST00000455085 407 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 RNU6-221P-201ENST00000459541 99 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 RNA5SP364-201ENST00000516938 78 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 SNORA31.17-201ENST00000516953 127 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 CBX3P4-201ENST00000538909 354 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.67□□□□□ -2.14
SP9P0CG40 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.67□□□□□ -2.14
SP9P0CG40 MIR5695-201ENST00000579717 85 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 AC069114.2-201ENST00000604699 304 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 AC126177.8-201ENST00000618339 1015 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.67□□□□□ -2.14
SP9P0CG40 MIR338-201ENST00000636369 67 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 CENPCP1-201ENST00000533085 2578 ntBASIC1.67□□□□□ -2.14
SP9P0CG40 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.67□□□□□ -2.14
SP9P0CG40 MTND5P16-201ENST00000460269 1703 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.66□□□□□ -2.14
SP9P0CG40 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SP9P0CG40 RNU6-727P-201ENST00000363592 107 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 U3.8-201ENST00000363675 217 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 SNORD114-22-201ENST00000365423 72 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SP9P0CG40 RNA5SP338-201ENST00000410495 85 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 CST2P1-201ENST00000425770 87 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.66□□□□□ -2.14
SP9P0CG40 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
SP9P0CG40 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 SCARNA16.2-201ENST00000516520 172 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 AC025647.1-201ENST00000517879 253 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 AC011604.1-201ENST00000545978 196 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.66□□□□□ -2.14
SP9P0CG40 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 MZT1P2-201ENST00000604387 248 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 AC010999.1-201ENST00000611856 324 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 AL669831.3-213ENST00000636676 183 ntBASIC1.66□□□□□ -2.14
SP9P0CG40 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SP9P0CG40 RNU6-874P-201ENST00000362390 105 ntBASIC1.65□□□□□ -2.15
SP9P0CG40 snoU2-30.2-201ENST00000362805 70 ntBASIC1.65□□□□□ -2.15
SP9P0CG40 RNU6-1019P-201ENST00000364424 107 ntBASIC1.65□□□□□ -2.15
SP9P0CG40 Y_RNA.364-201ENST00000365532 101 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms