Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDKAL1Q5VV42 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDKAL1Q5VV42 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDKAL1Q5VV42 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 AL136164.4-201ENST00000625013 2135 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 RNY1P11-201ENST00000363759 113 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 Y_RNA.251-201ENST00000364551 99 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 MIR1185-2-201ENST00000408687 86 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 MIR1278-201ENST00000408753 81 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 SRIP1-201ENST00000489235 288 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 RPS27P26-201ENST00000494583 239 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 RPL17P51-201ENST00000605218 238 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKAL1Q5VV42 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 snoU2_19.1-201ENST00000362361 80 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 SNORD32B-201ENST00000364460 84 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 SNORD67-201ENST00000390833 111 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 RNU6-460P-201ENST00000391158 108 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 SNORA12-201ENST00000391162 147 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 AP004217.1-201ENST00000480579 346 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 RN7SL633P-201ENST00000488974 297 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 RNU7-115P-201ENST00000516433 55 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 GABRG2-229ENST00000641017 3628 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 AL159152.1-201ENST00000635019 2587 ntBASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CDKAL1Q5VV42 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 RNU6-728P-201ENST00000365375 104 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 Y_RNA.393-201ENST00000383936 102 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 SNORD37.2-201ENST00000391075 66 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 RNU6-383P-201ENST00000410864 94 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 AC010154.1-201ENST00000425857 269 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 RN7SL863P-201ENST00000462370 296 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 RPL21P10-201ENST00000463521 490 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 AC091153.1-201ENST00000466297 402 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 HSPE1P18-201ENST00000517602 280 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 AC023632.4-201ENST00000517783 191 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 AC007318.2-201ENST00000620999 243 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 MIR6844-201ENST00000637122 62 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 MIR622-201ENST00000638396 96 ntBASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKAL1Q5VV42 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 MIR367-201ENST00000362299 68 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 Y_RNA.124-201ENST00000363339 93 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 RNY3P5-201ENST00000384127 102 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 AL355796.1-201ENST00000406706 323 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 RPL23AP7-203ENST00000449021 469 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 HSPE1P13-201ENST00000451143 297 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 AC112771.1-201ENST00000463581 102 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 HMGN2P9-201ENST00000476875 229 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 UBL5P2-201ENST00000583788 219 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 MIR548AY-201ENST00000617669 107 ntBASIC3.34□□□□□ -1.87
CDKAL1Q5VV42 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CDKAL1Q5VV42 CENPCP1-201ENST00000533085 2578 ntBASIC3.34□□□□□ -1.88
CDKAL1Q5VV42 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
CDKAL1Q5VV42 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CDKAL1Q5VV42 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
CDKAL1Q5VV42 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 AC091152.2-201ENST00000591628 2569 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 RNU6-1305P-201ENST00000364353 104 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 SNORA51.4-201ENST00000364993 124 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 SNORA36B-201ENST00000410438 131 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 YME1L1P1-201ENST00000429435 297 ntBASIC3.33□□□□□ -1.88
CDKAL1Q5VV42 RPS27P1-201ENST00000450552 247 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms