Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPS29P26-201ENST00000477483 171 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 AC098869.1-201ENST00000481627 292 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 RN7SL20P-201ENST00000488827 297 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 RNU6-570P-201ENST00000517051 105 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 CYCSP26-201ENST00000534107 320 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 MIR4319-201ENST00000577285 85 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 AC022441.3-201ENST00000605737 136 ntBASIC2.6□□□□□ -1.99
NKX6-1P78426 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX6-1P78426 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX6-1P78426 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX6-1P78426 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX6-1P78426 AC092593.1-201ENST00000515413 1815 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 RNU4-82P-201ENST00000362443 140 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 RNU6-1266P-201ENST00000362794 105 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 Y_RNA.99-201ENST00000363138 105 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 RNU4-30P-201ENST00000410245 143 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 RNU6-57P-201ENST00000411348 103 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX6-1P78426 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 RNU6-155P-201ENST00000516347 100 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX6-1P78426 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX6-1P78426 MIR6733-201ENST00000635723 61 ntBASIC2.59□□□□□ -1.99
NKX6-1P78426 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.59□□□□□ -2
NKX6-1P78426 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
NKX6-1P78426 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
NKX6-1P78426 SNORD81.1-201ENST00000363064 77 ntBASIC2.58□□□□□ -2
NKX6-1P78426 Y_RNA.193-201ENST00000363979 102 ntBASIC2.58□□□□□ -2
NKX6-1P78426 Y_RNA.288-201ENST00000364854 92 ntBASIC2.58□□□□□ -2
NKX6-1P78426 Y_RNA.446-201ENST00000384178 104 ntBASIC2.58□□□□□ -2
NKX6-1P78426 MIR1261-201ENST00000408659 82 ntBASIC2.58□□□□□ -2
NKX6-1P78426 RNU2-54P-201ENST00000410299 190 ntBASIC2.58□□□□□ -2
NKX6-1P78426 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.58□□□□□ -2
NKX6-1P78426 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
NKX6-1P78426 AL357134.1-201ENST00000445848 426 ntBASIC2.58□□□□□ -2
NKX6-1P78426 AC016717.1-201ENST00000448918 286 ntBASIC2.58□□□□□ -2
NKX6-1P78426 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.58□□□□□ -2
NKX6-1P78426 RNU6-496P-201ENST00000516145 99 ntBASIC2.58□□□□□ -2
NKX6-1P78426 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.58□□□□□ -2
NKX6-1P78426 AC055872.1-201ENST00000570978 278 ntBASIC2.58□□□□□ -2
NKX6-1P78426 AC037487.3-201ENST00000606668 112 ntBASIC2.58□□□□□ -2
NKX6-1P78426 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.58□□□□□ -2
NKX6-1P78426 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
NKX6-1P78426 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.57□□□□□ -2
NKX6-1P78426 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.57□□□□□ -2
NKX6-1P78426 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
NKX6-1P78426 Y_RNA.84-201ENST00000363011 104 ntBASIC2.57□□□□□ -2
NKX6-1P78426 snoU2_19.2-201ENST00000363024 80 ntBASIC2.57□□□□□ -2
NKX6-1P78426 Y_RNA.101-201ENST00000363154 102 ntBASIC2.57□□□□□ -2
NKX6-1P78426 RNU6-574P-201ENST00000384265 107 ntBASIC2.57□□□□□ -2
NKX6-1P78426 SNORD14D-201ENST00000384390 87 ntBASIC2.57□□□□□ -2
NKX6-1P78426 SNORA53-201ENST00000391141 249 ntBASIC2.57□□□□□ -2
NKX6-1P78426 AC009963.1-201ENST00000417265 157 ntBASIC2.57□□□□□ -2
NKX6-1P78426 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.57□□□□□ -2
NKX6-1P78426 AC008134.1-201ENST00000420943 193 ntBASIC2.57□□□□□ -2
NKX6-1P78426 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.57□□□□□ -2
NKX6-1P78426 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.57□□□□□ -2
NKX6-1P78426 RNU6-221P-201ENST00000459541 99 ntBASIC2.57□□□□□ -2
NKX6-1P78426 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
NKX6-1P78426 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
NKX6-1P78426 AC008749.1-201ENST00000597650 306 ntBASIC2.57□□□□□ -2
NKX6-1P78426 AC007318.2-201ENST00000620999 243 ntBASIC2.57□□□□□ -2
NKX6-1P78426 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.57□□□□□ -2
NKX6-1P78426 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
NKX6-1P78426 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.56□□□□□ -2
NKX6-1P78426 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NKX6-1P78426 RNU6-290P-201ENST00000365212 101 ntBASIC2.56□□□□□ -2
NKX6-1P78426 Y_RNA.401-201ENST00000383965 117 ntBASIC2.56□□□□□ -2
NKX6-1P78426 MIR215-201ENST00000384858 110 ntBASIC2.56□□□□□ -2
NKX6-1P78426 RNU6-1203P-201ENST00000410703 110 ntBASIC2.56□□□□□ -2
NKX6-1P78426 AC139712.2-201ENST00000424302 339 ntBASIC2.56□□□□□ -2
NKX6-1P78426 POLR2KP2-201ENST00000438155 177 ntBASIC2.56□□□□□ -2
NKX6-1P78426 MTCO1P44-201ENST00000441935 243 ntBASIC2.56□□□□□ -2
NKX6-1P78426 SUMO1P2-201ENST00000452524 304 ntBASIC2.56□□□□□ -2
NKX6-1P78426 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
NKX6-1P78426 TRBV12-1-201ENST00000479785 344 ntBASIC2.56□□□□□ -2
NKX6-1P78426 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
NKX6-1P78426 RN7SKP132-201ENST00000516001 208 ntBASIC2.56□□□□□ -2
NKX6-1P78426 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
NKX6-1P78426 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
NKX6-1P78426 AL590240.4-201ENST00000616908 390 ntBASIC2.56□□□□□ -2
NKX6-1P78426 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.56□□□□□ -2
NKX6-1P78426 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
NKX6-1P78426 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NKX6-1P78426 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.55□□□□□ -2
NKX6-1P78426 AC062016.1-201ENST00000355719 319 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU6-324P-201ENST00000363957 106 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU6-454P-201ENST00000364292 107 ntBASIC2.55□□□□□ -2
NKX6-1P78426 Y_RNA.396-201ENST00000383949 103 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU1-109P-201ENST00000383960 147 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU6-851P-201ENST00000384565 107 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU6-160P-201ENST00000384591 107 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNA5SP274-201ENST00000410484 108 ntBASIC2.55□□□□□ -2
NKX6-1P78426 AC063976.3-201ENST00000426849 329 ntBASIC2.55□□□□□ -2
NKX6-1P78426 HSPE1P25-201ENST00000455484 251 ntBASIC2.55□□□□□ -2
NKX6-1P78426 AP004217.1-201ENST00000480579 346 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms