Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RPL39P38-201ENST00000467018 153 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 AC018868.1-201ENST00000491307 315 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 RNU6-1023P-201ENST00000516137 106 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 RNU6-789P-201ENST00000517105 102 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 RNU6-111P-201ENST00000517179 105 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 AC104576.1-201ENST00000524225 88 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 CYCSP27-201ENST00000527643 293 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC13P31276 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC13P31276 AC098479.1-201ENST00000609225 154 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 MIR4272-201ENST00000635924 64 ntBASIC2.28□□□□□ -2.04
HOXC13P31276 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC13P31276 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-428P-201ENST00000362942 107 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-770P-201ENST00000363929 105 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-546P-201ENST00000383991 107 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-611P-201ENST00000384276 104 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 SNORA48.3-201ENST00000391081 134 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-1093P-201ENST00000391194 107 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HOXC13P31276 MTCO2P33-201ENST00000402100 465 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-1156P-201ENST00000410365 100 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNA5SP247-201ENST00000411181 105 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU2-32P-201ENST00000411193 191 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 PIGPP3-201ENST00000425307 415 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 AC073910.1-201ENST00000445047 438 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 AC013470.1-201ENST00000453438 462 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RPL23AP3-201ENST00000453844 468 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 FO393415.2-201ENST00000480085 343 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 SCARNA16.3-201ENST00000516595 184 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 RNU6-667P-201ENST00000517186 102 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 HSPE1P18-201ENST00000517602 280 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 SUB1P3-201ENST00000564581 315 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 AC006600.1-201ENST00000572529 153 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC13P31276 AC012433.1-201ENST00000588916 398 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.27□□□□□ -2.05
HOXC13P31276 RAC1P9-201ENST00000604990 392 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
HOXC13P31276 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC13P31276 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
HOXC13P31276 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC13P31276 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC13P31276 Y_RNA.4-201ENST00000362333 112 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 Y_RNA.150-201ENST00000363562 102 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 SNORD27-201ENST00000363981 72 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNU4-42P-201ENST00000364738 142 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNU6-200P-201ENST00000364743 107 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNU6-336P-201ENST00000364891 107 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 SNORD73A-201ENST00000386062 65 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNA5SP465-201ENST00000391195 109 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNU2-2P-201ENST00000410396 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 AL590135.1-201ENST00000422215 156 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC13P31276 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC13P31276 PRELID3BP1-201ENST00000457142 540 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 SNRPGP7-201ENST00000469016 106 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RPL17P19-201ENST00000489069 552 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC13P31276 AK3P2-201ENST00000507976 429 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNA5SP458-201ENST00000516188 119 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 SNORA40.15-201ENST00000516884 107 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNU6-182P-201ENST00000516970 105 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC13P31276 AC233702.2-202ENST00000562547 291 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 AC090517.1-201ENST00000569307 266 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC13P31276 RNU6-85P-201ENST00000605989 107 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.15-201ENST00000611544 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.16-201ENST00000613119 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.12-201ENST00000613778 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.20-201ENST00000613956 192 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.9-201ENST00000615427 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.11-201ENST00000616345 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.2-201ENST00000616535 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.3-201ENST00000617785 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.19-201ENST00000618602 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 RNU2-1-201ENST00000618664 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.6-201ENST00000619225 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.5-201ENST00000619465 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 U2.10-201ENST00000620268 191 ntBASIC2.26□□□□□ -2.05
HOXC13P31276 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC13P31276 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HOXC13P31276 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HOXC13P31276 RNU6-827P-201ENST00000365553 106 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 RNU6-338P-201ENST00000383888 105 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 Y_RNA.562-201ENST00000384695 113 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HOXC13P31276 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC13P31276 AL645568.3-201ENST00000433683 316 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 PCMTD1P1-201ENST00000455560 355 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXC13P31276 RNU5F-2P-201ENST00000516066 82 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 SNORA40.14-201ENST00000516543 86 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 RNU6-897P-201ENST00000517135 105 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 AC008749.1-201ENST00000597650 306 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 AC010900.2-201ENST00000604508 210 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 279.3 ms