Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.56□□□□□ -2
SNHG28P0DPA3 MIR5571-201ENST00000577998 113 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 MIR3145-201ENST00000580727 82 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 MIR6134-201ENST00000617606 109 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 AC092881.1-201ENST00000638218 2733 ntBASIC2.56□□□□□ -2
SNHG28P0DPA3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SNHG28P0DPA3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNHG28P0DPA3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNHG28P0DPA3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
SNHG28P0DPA3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNHG28P0DPA3 MIR410-201ENST00000362222 80 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU6-81P-201ENST00000365608 104 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU1-109P-201ENST00000383960 147 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 MIR544A-201ENST00000384855 91 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 SNORA53-201ENST00000391141 249 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 AC099548.1-201ENST00000421443 426 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.55□□□□□ -2
SNHG28P0DPA3 SNRPGP7-201ENST00000469016 106 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RPS27AP10-201ENST00000496103 208 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 AP004607.1-201ENST00000524456 203 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.55□□□□□ -2
SNHG28P0DPA3 AC004832.4-201ENST00000608952 331 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.55□□□□□ -2
SNHG28P0DPA3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
SNHG28P0DPA3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.54□□□□□ -2
SNHG28P0DPA3 RNU6-653P-201ENST00000363074 106 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 MIR186-201ENST00000384988 86 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 MIR613-201ENST00000385248 95 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.54□□□□□ -2
SNHG28P0DPA3 AL512844.2-201ENST00000433990 593 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNHG28P0DPA3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.54□□□□□ -2
SNHG28P0DPA3 MTATP6P7-201ENST00000453315 681 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 AP001324.2-201ENST00000461163 319 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 AC140059.1-201ENST00000489238 361 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.54□□□□□ -2
SNHG28P0DPA3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.54□□□□□ -2
SNHG28P0DPA3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.54□□□□□ -2
SNHG28P0DPA3 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 snoU18.1-201ENST00000629629 71 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 MIR3529-201ENST00000637713 78 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNHG28P0DPA3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
SNHG28P0DPA3 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
SNHG28P0DPA3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNHG28P0DPA3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SNHG28P0DPA3 RNU6-799P-201ENST00000363567 107 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 RNU6-873P-201ENST00000363833 107 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 SNORA64-201ENST00000384674 134 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.53□□□□□ -2
SNHG28P0DPA3 SNORA48.3-201ENST00000391081 134 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 ELOCP21-201ENST00000412558 336 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 RPS15AP5-201ENST00000436276 388 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.53□□□□□ -2
SNHG28P0DPA3 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 AC007395.1-201ENST00000451333 677 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 RPS29P12-201ENST00000460178 152 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 RNU6-928P-201ENST00000516876 104 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.53□□□□□ -2
SNHG28P0DPA3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.53□□□□□ -2
SNHG28P0DPA3 CR383656.8-201ENST00000549046 145 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 HSPE1P4-201ENST00000550617 308 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNHG28P0DPA3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.53□□□□□ -2
SNHG28P0DPA3 AL713866.2-201ENST00000603579 219 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 AC019159.1-201ENST00000605094 187 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 AC022441.3-201ENST00000605737 136 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNHG28P0DPA3 AL110115.1-201ENST00000614396 364 ntBASIC2.53□□□□□ -2
SNHG28P0DPA3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.53□□□□□ -2
SNHG28P0DPA3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 SNORA25.1-201ENST00000362326 128 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 RNU4-80P-201ENST00000363200 141 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 SNORD115-8-201ENST00000363856 82 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 SNORD115-38-201ENST00000365037 82 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 RNU6-21P-201ENST00000384710 107 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 MIR1290-201ENST00000408735 78 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.52□□□□□ -2.01
SNHG28P0DPA3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
SNHG28P0DPA3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms