Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AL161670.1-201ENST00000554348 137 ntBASIC2.47□□□□□ -2.01
MBD3L3A6NE82 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3L3A6NE82 AC090115.4-201ENST00000609970 188 ntBASIC2.47□□□□□ -2.01
MBD3L3A6NE82 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
MBD3L3A6NE82 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3L3A6NE82 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3L3A6NE82 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 RNU6-859P-201ENST00000362728 107 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.446-201ENST00000384178 104 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 RNU6-160P-201ENST00000384591 107 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 MIR1302-6-201ENST00000408466 90 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AL357134.1-201ENST00000445848 426 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AC245102.2-201ENST00000448956 180 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 RNU6-221P-201ENST00000459541 99 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 SEPT14P8-201ENST00000508026 178 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AL031274.2-201ENST00000599419 203 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AC022441.3-201ENST00000605737 136 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 IGHVIII-44-202ENST00000636235 289 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 U6.104-201ENST00000637979 90 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AC092593.1-201ENST00000515413 1815 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 AL136360.1-201ENST00000503377 1900 ntBASIC2.46□□□□□ -2.02
MBD3L3A6NE82 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
MBD3L3A6NE82 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 RNU4-90P-201ENST00000362773 141 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 RNU1-112P-201ENST00000364401 164 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.376-201ENST00000365638 108 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.396-201ENST00000383949 103 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.581-201ENST00000391017 97 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 RPL21P3-201ENST00000395517 478 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 MTCO1P44-201ENST00000441935 243 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 TRBVB-201ENST00000477100 408 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 RN7SL283P-201ENST00000489055 303 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 MIR4503-201ENST00000582187 83 ntBASIC2.45□□□□□ -2.02
MBD3L3A6NE82 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD3L3A6NE82 AL161431.1-201ENST00000618966 4205 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 snoU2_19.2-201ENST00000363024 80 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 VTRNA1-1-201ENST00000363120 99 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 RNU6-324P-201ENST00000363957 106 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.286-201ENST00000364813 102 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 RNU2-54P-201ENST00000410299 190 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 HSPE1P25-201ENST00000455484 251 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 RN7SL75P-201ENST00000461926 281 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 HMGB3P17-201ENST00000504195 649 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 RNU6-496P-201ENST00000516145 99 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AC007536.1-201ENST00000533382 349 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 MIR3149-201ENST00000584629 83 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 ZNF861P-201ENST00000588126 639 ntBASIC2.44□□□□□ -2.02
MBD3L3A6NE82 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.44□□□□□ -2.02
MBD3L3A6NE82 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MIR340-201ENST00000362125 95 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MIR148B-201ENST00000362252 99 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.84-201ENST00000363011 104 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 Y_RNA.483-201ENST00000384380 101 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MIR196B-201ENST00000384852 84 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MIR887-201ENST00000401258 79 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC009963.1-201ENST00000417265 157 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 POLR2KP2-201ENST00000438155 177 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 RNU6-966P-201ENST00000516479 104 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 RNU6-856P-201ENST00000516959 98 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MIR3945-201ENST00000581853 98 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD3L3A6NE82 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 U4.1-201ENST00000620349 87 ntBASIC2.43□□□□□ -2.02
MBD3L3A6NE82 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms