Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 RNU4-20P-201ENST00000365601 151 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 EIF4E2P1-201ENST00000393781 255 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 RNU6-1208P-201ENST00000459588 107 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 AL390123.1-201ENST00000603216 237 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
LRRC40Q9H9A6 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 MRPL42P3-201ENST00000401492 326 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AL034345.1-201ENST00000407768 123 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 RNA5SP504-201ENST00000410676 117 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AC092447.3-201ENST00000426027 686 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 Z82205.1-201ENST00000428456 297 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 RNU6-261P-201ENST00000459506 102 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AC092991.1-201ENST00000477176 376 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 RNA5SP454-201ENST00000517231 127 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 MTND1P5-201ENST00000517906 940 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AL137100.2-201ENST00000555786 315 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AC017083.3-201ENST00000609955 700 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AC073534.2-201ENST00000620377 381 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AC106754.2-201ENST00000623006 233 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 SNORD3E-202ENST00000627253 216 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 AL133216.2-202ENST00000634512 349 ntBASIC1.01□□□□□ -2.25
LRRC40Q9H9A6 SNORA69-201ENST00000383895 132 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 RNU6-245P-201ENST00000384020 107 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1□□□□□ -2.25
LRRC40Q9H9A6 RAB28P5-201ENST00000427490 651 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 AC092473.1-201ENST00000441098 221 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1□□□□□ -2.25
LRRC40Q9H9A6 AC083798.1-201ENST00000472671 131 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 AC104383.1-201ENST00000530297 370 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 AC026371.1-201ENST00000551867 419 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1□□□□□ -2.25
LRRC40Q9H9A6 MIR5695-201ENST00000579717 85 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 B3GNTL1P2-201ENST00000603673 288 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 AP001330.5-201ENST00000607176 411 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 DLEU2_1.1-201ENST00000612089 120 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 DLEU2_1.2-201ENST00000614667 120 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 OR4G1P-203ENST00000641984 1631 ntBASIC1□□□□□ -2.25
LRRC40Q9H9A6 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AL590002.1-201ENST00000406554 418 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AL353572.1-201ENST00000442490 417 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 MTND3P16-201ENST00000452205 344 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 RNU6-922P-201ENST00000516753 99 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AC016957.1-201ENST00000534895 309 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AC004584.2-201ENST00000570407 410 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AC119751.7-201ENST00000600494 245 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AL513534.2-201ENST00000603836 250 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AL513423.1-201ENST00000621695 132 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LRRC40Q9H9A6 RNU6-1322P-201ENST00000364309 107 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 SNORD87-201ENST00000364849 89 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 RNU6-505P-201ENST00000384427 107 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 MIR32-201ENST00000384965 70 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 RNU6-910P-201ENST00000390844 107 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 MIR1185-2-201ENST00000408687 86 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 SNORA31.2-201ENST00000516019 134 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 SNORA31.4-201ENST00000516049 129 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 RNU7-99P-201ENST00000516271 62 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 SNORA25.14-201ENST00000516481 132 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 RNU6-1198P-201ENST00000516904 67 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AC136932.1-201ENST00000574771 208 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AC080078.3-201ENST00000605407 463 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AL133215.3-201ENST00000609801 448 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AC073349.3-201ENST00000617616 186 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 U6.73-201ENST00000619194 103 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AL359757.2-201ENST00000624309 274 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 AC091895.1-201ENST00000624494 256 ntBASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LRRC40Q9H9A6 RNU6-1266P-201ENST00000362794 105 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 RNU4-76P-201ENST00000364509 141 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 RNU6-392P-201ENST00000364926 101 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 Y_RNA.409-201ENST00000383990 98 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 RNU6-790P-201ENST00000384479 105 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 Y_RNA.582-201ENST00000391023 95 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 AC091133.4-201ENST00000511142 308 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 RNU7-128P-201ENST00000517247 62 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 AC022432.1-201ENST00000595739 310 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 AL162424.1-201ENST00000602325 221 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms