Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR448-201ENST00000362131 111 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR323A-201ENST00000362199 86 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNA5SP123-201ENST00000363244 119 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD113.2-201ENST00000364166 89 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNA5SP387-201ENST00000364226 106 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNA5SP482-201ENST00000391269 118 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-402P-201ENST00000410678 103 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU2-63P-201ENST00000410792 194 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORA74C-2-201ENST00000411179 201 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ABCF2P2-201ENST00000450549 296 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 CYCSP35-201ENST00000451978 304 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU2-11P-201ENST00000459191 187 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU7-96P-201ENST00000459535 64 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 AC231760.1-201ENST00000498002 260 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-521P-201ENST00000516663 105 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 AC004812.1-201ENST00000540773 146 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR3176-201ENST00000582210 90 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 HSPE1P19-201ENST00000603327 295 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 AL513534.2-201ENST00000603836 250 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR6861-201ENST00000618657 64 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR6891-201ENST00000618788 93 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MAPK10-286ENST00000641208 8747 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ZNF962P-201ENST00000443465 3140 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 GABRG2-229ENST00000641017 3628 ntBASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD74.4-201ENST00000364129 80 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 Y_RNA.377-201ENST00000365644 108 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-979P-201ENST00000383896 107 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORA27-201ENST00000384323 126 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR621-201ENST00000384919 96 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR659-201ENST00000384963 97 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 PTMAP2-201ENST00000397627 327 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 RNA5SP39-201ENST00000411245 120 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 BTF3P4-201ENST00000418852 495 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 AC093162.1-201ENST00000419682 124 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-857P-201ENST00000515893 110 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 IFITM8P-201ENST00000522529 394 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 AL356218.2-201ENST00000605264 187 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR432-201ENST00000606207 94 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 Y_RNA.773-201ENST00000607168 90 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 AC091905.4-201ENST00000623432 202 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 AC021613.1-201ENST00000623880 111 ntBASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP3-1Q9BYR8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 AL022322.2-201ENST00000624072 20397 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 OTUD4P1-201ENST00000237841 3067 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 ICE2P2-201ENST00000483823 2787 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD115-13-201ENST00000363358 82 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-1125P-201ENST00000363601 107 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD115-16-201ENST00000363887 82 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 Y_RNA.241-201ENST00000364470 117 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD115-1-201ENST00000364961 82 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD115-35-201ENST00000365122 82 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 Y_RNA.437-201ENST00000384113 113 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR605-201ENST00000385078 83 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR765-201ENST00000390226 114 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD77B-201ENST00000391112 67 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 SNORD66.1-201ENST00000391230 76 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-887P-201ENST00000410660 100 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 MIR1911-201ENST00000410783 80 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 RNU6-1328P-201ENST00000410938 106 ntBASIC2.25□□□□□ -2.05
KRTAP3-1Q9BYR8 AC004552.1-201ENST00000419089 348 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms