Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU1-22P-201ENST00000363334 158 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 SNORA67.2-201ENST00000384300 149 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AC016909.1-201ENST00000415916 166 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AC008134.1-201ENST00000420943 193 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 SRRM1P2-201ENST00000464531 1192 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 HMGB1P29-201ENST00000505659 499 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 SNORA40.12-201ENST00000516329 111 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AC025647.1-201ENST00000517879 253 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 CYCSP23-201ENST00000519781 313 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AL118558.2-201ENST00000556294 238 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AL359075.3-201ENST00000613288 217 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
LRRC40Q9H9A6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 RNU6-38P-201ENST00000384085 107 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 RNU6-933P-201ENST00000384424 107 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 RN7SKP200-201ENST00000410564 320 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 RNU6-956P-201ENST00000458868 103 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 RPL39P38-201ENST00000467018 153 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 MTCO1P29-201ENST00000496868 288 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 SNORA31.10-201ENST00000516482 106 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 RNU6-344P-201ENST00000516635 111 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 AL158063.1-201ENST00000615349 536 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 AC008873.1-201ENST00000625051 138 ntBASIC1.07□□□□□ -2.24
LRRC40Q9H9A6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 SNORA75-201ENST00000384158 137 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 RNU6-784P-201ENST00000384330 106 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 MIR487A-201ENST00000385009 80 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 MIR450B-201ENST00000401182 78 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 DYNLT3P2-201ENST00000442517 295 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 RNU6-221P-201ENST00000459541 99 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 Y_RNA.654-201ENST00000497848 106 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 RN7SKP298-201ENST00000515950 94 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 Y_RNA.717-201ENST00000517106 92 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 CPDP1-201ENST00000579660 283 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 AC022217.4-201ENST00000604389 163 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 Z69908.1-201ENST00000622603 247 ntBASIC1.06□□□□□ -2.24
LRRC40Q9H9A6 SNRPEP10-201ENST00000420249 274 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 AL163540.1-201ENST00000485382 386 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 RPL23AP75-201ENST00000491601 451 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 RNA5SP458-201ENST00000516188 119 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 MIR4769-201ENST00000584126 77 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 MIR8054-201ENST00000620877 86 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 U6.108-201ENST00000637764 58 ntBASIC1.05□□□□□ -2.24
LRRC40Q9H9A6 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 MTCO2P16-201ENST00000436962 677 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AC005002.2-201ENST00000438228 269 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 BET1P1-201ENST00000482276 359 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 RNU6-1332P-201ENST00000516666 104 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 RNA5SP54-201ENST00000516951 92 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AC121247.2-201ENST00000604776 136 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 snoU13.31-201ENST00000607291 104 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 AC092807.2-201ENST00000609367 243 ntBASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
LRRC40Q9H9A6 RNU6-440P-201ENST00000390882 105 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 FGF7P8-201ENST00000402994 292 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 RNU4-55P-201ENST00000410731 137 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 AC245047.3-201ENST00000429428 127 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 AC091885.1-201ENST00000506658 268 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 AC100830.2-201ENST00000581636 240 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 SNORD11B-201ENST00000607707 90 ntBASIC1.03□□□□□ -2.24
LRRC40Q9H9A6 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms