Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNU4-90P-201ENST00000362773 141 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RNA5SP126-201ENST00000365092 109 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RNU6-245P-201ENST00000384020 107 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RNU6-793P-201ENST00000384233 104 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 Y_RNA.478-201ENST00000384358 107 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 Y_RNA.539-201ENST00000384635 107 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RNU5A-5P-201ENST00000411054 116 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
PNKPQ96T60 Z98949.2-201ENST00000440996 144 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.87□□□□□ -1.95
PNKPQ96T60 UQCRBP2-201ENST00000447827 297 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.87□□□□□ -1.95
PNKPQ96T60 RN7SL429P-201ENST00000479090 223 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RN7SL489P-201ENST00000486185 223 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RN7SL327P-201ENST00000488659 223 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 SEPT14P8-201ENST00000508026 178 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.87□□□□□ -1.95
PNKPQ96T60 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.87□□□□□ -1.95
PNKPQ96T60 AC055872.1-201ENST00000570978 278 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.87□□□□□ -1.95
PNKPQ96T60 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.87□□□□□ -1.95
PNKPQ96T60 SNRPGP20-201ENST00000604477 205 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 SNORD113-5-201ENST00000607261 78 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 AC011373.1-201ENST00000607270 237 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RN7SL853P-201ENST00000617250 223 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
PNKPQ96T60 AL359854.1-201ENST00000614203 1594 ntBASIC2.87□□□□□ -1.95
PNKPQ96T60 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PNKPQ96T60 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PNKPQ96T60 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PNKPQ96T60 RNU5F-3P-201ENST00000363767 117 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 Y_RNA.277-201ENST00000364754 102 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 RNU6-1175P-201ENST00000365200 107 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 RNU6-290P-201ENST00000365212 101 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 RNU6-21P-201ENST00000384710 107 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 Y_RNA.570-201ENST00000384750 101 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 SNORA46.1-201ENST00000391069 153 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 SNORA12-201ENST00000391162 147 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 AL139095.1-201ENST00000404326 391 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 AC027124.2-201ENST00000428249 105 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 AL139109.1-201ENST00000455491 297 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.86□□□□□ -1.95
PNKPQ96T60 RPS23P5-201ENST00000495419 428 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.86□□□□□ -1.95
PNKPQ96T60 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.86□□□□□ -1.95
PNKPQ96T60 AK6P2-201ENST00000549020 471 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 EIF4A1P12-201ENST00000551910 141 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 AC018448.1-201ENST00000552843 316 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.86□□□□□ -1.95
PNKPQ96T60 MIR4765-201ENST00000585007 77 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 IGHVIII-44-202ENST00000636235 289 ntBASIC2.86□□□□□ -1.95
PNKPQ96T60 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
PNKPQ96T60 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PNKPQ96T60 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.85□□□□□ -1.95
PNKPQ96T60 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.85□□□□□ -1.95
PNKPQ96T60 MIR6073-201ENST00000352083 89 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 U3.9-201ENST00000363823 204 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 RNU1-112P-201ENST00000364401 164 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 Y_RNA.352-201ENST00000365439 102 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 RNU6-338P-201ENST00000383888 105 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 AC004866.1-201ENST00000411748 78 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 ELOCP21-201ENST00000412558 336 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 EIF4EP4-201ENST00000424916 578 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 IFNA11P-201ENST00000446352 526 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 AC007395.1-201ENST00000451333 677 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 RPL23AP3-201ENST00000453844 468 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 RNU6-625P-201ENST00000459412 107 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.85□□□□□ -1.95
PNKPQ96T60 SERF1AP1-201ENST00000514575 187 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.85□□□□□ -1.95
PNKPQ96T60 DEFB131C-201ENST00000528817 165 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.85□□□□□ -1.95
PNKPQ96T60 AC233702.2-202ENST00000562547 291 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 AC005176.2-201ENST00000596933 147 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.85□□□□□ -1.95
PNKPQ96T60 AC091564.4-201ENST00000533934 2194 ntBASIC2.85□□□□□ -1.95
PNKPQ96T60 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.85□□□□□ -1.95
PNKPQ96T60 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PNKPQ96T60 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.84□□□□□ -1.95
PNKPQ96T60 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
PNKPQ96T60 AC069528.2-201ENST00000624849 1991 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
PNKPQ96T60 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PNKPQ96T60 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PNKPQ96T60 RNU4-82P-201ENST00000362443 140 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 RNU6-859P-201ENST00000362728 107 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 RNU6-1266P-201ENST00000362794 105 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 Y_RNA.65-201ENST00000362846 100 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 Y_RNA.230-201ENST00000364348 109 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 Y_RNA.498-201ENST00000384460 102 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 RNA5SP210-201ENST00000391034 120 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 AL033519.2-201ENST00000403958 392 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 MIR320B2-201ENST00000408479 138 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 RNA5SP21-201ENST00000410917 96 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.84□□□□□ -1.95
PNKPQ96T60 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms