Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KLF4O43474 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
KLF4O43474 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KLF4O43474 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KLF4O43474 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
KLF4O43474 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
KLF4O43474 AC017071.1-201ENST00000564407 2204 ntBASIC3.11□□□□□ -1.91
KLF4O43474 RNU4-80P-201ENST00000363200 141 ntBASIC3.11□□□□□ -1.91
KLF4O43474 RNU6-1240P-201ENST00000365155 104 ntBASIC3.11□□□□□ -1.91
KLF4O43474 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.11□□□□□ -1.91
KLF4O43474 RN7SKP111-201ENST00000410349 271 ntBASIC3.11□□□□□ -1.91
KLF4O43474 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.11□□□□□ -1.91
KLF4O43474 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.11□□□□□ -1.91
KLF4O43474 PRELID3BP1-201ENST00000457142 540 ntBASIC3.11□□□□□ -1.91
KLF4O43474 RNU7-26P-201ENST00000458980 63 ntBASIC3.11□□□□□ -1.91
KLF4O43474 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
KLF4O43474 MTND1P19-201ENST00000511780 315 ntBASIC3.11□□□□□ -1.91
KLF4O43474 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
KLF4O43474 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.11□□□□□ -1.91
KLF4O43474 AC006435.5-201ENST00000624486 112 ntBASIC3.11□□□□□ -1.91
KLF4O43474 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.11□□□□□ -1.91
KLF4O43474 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
KLF4O43474 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
KLF4O43474 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KLF4O43474 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
KLF4O43474 Y_RNA.65-201ENST00000362846 100 ntBASIC3.1□□□□□ -1.91
KLF4O43474 Y_RNA.99-201ENST00000363138 105 ntBASIC3.1□□□□□ -1.91
KLF4O43474 MIR491-201ENST00000384877 84 ntBASIC3.1□□□□□ -1.91
KLF4O43474 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
KLF4O43474 HMGN1P18-201ENST00000457642 277 ntBASIC3.1□□□□□ -1.91
KLF4O43474 Y_RNA.679-201ENST00000516416 91 ntBASIC3.1□□□□□ -1.91
KLF4O43474 SNORA70.24-201ENST00000517233 118 ntBASIC3.1□□□□□ -1.91
KLF4O43474 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
KLF4O43474 AC078938.1-201ENST00000620993 318 ntBASIC3.1□□□□□ -1.91
KLF4O43474 AC091953.5-201ENST00000622919 233 ntBASIC3.1□□□□□ -1.91
KLF4O43474 AC073476.4-201ENST00000628409 72 ntBASIC3.1□□□□□ -1.91
KLF4O43474 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
KLF4O43474 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.1□□□□□ -1.91
KLF4O43474 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
KLF4O43474 UBE2WP1-201ENST00000362030 340 ntBASIC3.09□□□□□ -1.91
KLF4O43474 RNU1-33P-201ENST00000364249 162 ntBASIC3.09□□□□□ -1.91
KLF4O43474 Y_RNA.275-201ENST00000364726 110 ntBASIC3.09□□□□□ -1.91
KLF4O43474 MIR1253-201ENST00000408273 105 ntBASIC3.09□□□□□ -1.91
KLF4O43474 Y_RNA.590-201ENST00000410140 107 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.09□□□□□ -1.91
KLF4O43474 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
KLF4O43474 MTCO1P44-201ENST00000441935 243 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC008155.2-201ENST00000464337 397 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC010531.2-201ENST00000465012 153 ntBASIC3.09□□□□□ -1.91
KLF4O43474 RNU6-1146P-201ENST00000516282 102 ntBASIC3.09□□□□□ -1.91
KLF4O43474 RNU6-966P-201ENST00000516479 104 ntBASIC3.09□□□□□ -1.91
KLF4O43474 RNU6-111P-201ENST00000517179 105 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC025647.1-201ENST00000517879 253 ntBASIC3.09□□□□□ -1.91
KLF4O43474 RPL21P9-201ENST00000556149 474 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.09□□□□□ -1.91
KLF4O43474 AC009127.3-201ENST00000570531 403 ntBASIC3.09□□□□□ -1.91
KLF4O43474 MIR3145-201ENST00000580727 82 ntBASIC3.09□□□□□ -1.91
KLF4O43474 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
KLF4O43474 MIR5195-201ENST00000583555 115 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC010900.2-201ENST00000604508 210 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC005828.6-201ENST00000606610 232 ntBASIC3.09□□□□□ -1.91
KLF4O43474 AC090115.4-201ENST00000609970 188 ntBASIC3.09□□□□□ -1.91
KLF4O43474 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
KLF4O43474 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
KLF4O43474 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
KLF4O43474 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KLF4O43474 AL159152.1-201ENST00000635019 2587 ntBASIC3.08□□□□□ -1.92
KLF4O43474 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KLF4O43474 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
KLF4O43474 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
KLF4O43474 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLF4O43474 RNU1-91P-201ENST00000364746 163 ntBASIC3.08□□□□□ -1.92
KLF4O43474 RNU6-805P-201ENST00000365643 106 ntBASIC3.08□□□□□ -1.92
KLF4O43474 MIR483-201ENST00000385070 76 ntBASIC3.08□□□□□ -1.92
KLF4O43474 MIR873-201ENST00000401120 77 ntBASIC3.08□□□□□ -1.92
KLF4O43474 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.08□□□□□ -1.92
KLF4O43474 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.08□□□□□ -1.92
KLF4O43474 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.08□□□□□ -1.92
KLF4O43474 AL139109.1-201ENST00000455491 297 ntBASIC3.08□□□□□ -1.92
KLF4O43474 SNORD65B-201ENST00000459126 73 ntBASIC3.08□□□□□ -1.92
KLF4O43474 RPL21P10-201ENST00000463521 490 ntBASIC3.08□□□□□ -1.92
KLF4O43474 AC025518.1-201ENST00000479856 347 ntBASIC3.08□□□□□ -1.92
KLF4O43474 RNU6-191P-201ENST00000516295 94 ntBASIC3.08□□□□□ -1.92
KLF4O43474 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
KLF4O43474 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.08□□□□□ -1.92
KLF4O43474 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.08□□□□□ -1.92
KLF4O43474 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.08□□□□□ -1.92
KLF4O43474 MIR3126-201ENST00000577443 74 ntBASIC3.08□□□□□ -1.92
KLF4O43474 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.08□□□□□ -1.92
KLF4O43474 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
KLF4O43474 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLF4O43474 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLF4O43474 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLF4O43474 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KLF4O43474 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
KLF4O43474 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KLF4O43474 RNU4-35P-201ENST00000362588 141 ntBASIC3.07□□□□□ -1.92
KLF4O43474 RNU6-338P-201ENST00000383888 105 ntBASIC3.07□□□□□ -1.92
KLF4O43474 RNU6-160P-201ENST00000384591 107 ntBASIC3.07□□□□□ -1.92
KLF4O43474 SNORA26.7-201ENST00000391288 122 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms