Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTND5P9-201ENST00000503854 1755 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 MIR32-201ENST00000384965 70 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AC007395.1-201ENST00000451333 677 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-329P-201ENST00000459618 107 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 RPL23AP63-201ENST00000498752 471 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 MIR4742-201ENST00000581069 85 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AC011712.1-201ENST00000588959 234 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AC137590.2-201ENST00000619709 240 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 AL133216.2-202ENST00000634512 349 ntBASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
ATG4BQ9Y4P1 ZNF204P-201ENST00000416749 2397 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 CYCSP49-201ENST00000420810 319 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 USP9YP30-201ENST00000430729 455 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 MTND1P17-201ENST00000448961 204 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 MTCO3P8-201ENST00000453691 755 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 HMGN2P23-201ENST00000456759 269 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 SCARNA4-201ENST00000629045 128 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 MTND4P5-201ENST00000435821 1374 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 CASC19-280ENST00000642102 1351 ntBASIC1.68□□□□□ -2.14
ATG4BQ9Y4P1 MIR340-201ENST00000362125 95 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 RNU4-9P-201ENST00000364951 139 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-876P-201ENST00000391295 104 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 MIR300-201ENST00000401138 83 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 MIR548F5-201ENST00000408421 86 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 RNA5SP100-201ENST00000410903 110 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 RNA5SP59-201ENST00000410922 110 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 MTND3P8-201ENST00000412909 339 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AL445305.1-201ENST00000432577 575 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AL357134.1-201ENST00000445848 426 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 FGF7P6-202ENST00000451282 293 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 MIR4769-201ENST00000584126 77 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AC103810.8-201ENST00000607347 118 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 AC122108.2-201ENST00000611946 526 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ATG4BQ9Y4P1 U8.10-201ENST00000384260 133 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 MIR320B2-201ENST00000408479 138 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 MTCO3P46-201ENST00000425787 232 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 AC010531.2-201ENST00000465012 153 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 RNU2-34P-201ENST00000516534 121 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 GNAI2P1-201ENST00000541815 315 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 SUB1P4-201ENST00000566062 339 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 MIR4753-201ENST00000585119 83 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 SNRPGP20-201ENST00000604477 205 ntBASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
ATG4BQ9Y4P1 RNA5SP432-201ENST00000362480 116 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.48-201ENST00000362710 103 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-418P-201ENST00000384035 107 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-541P-201ENST00000384709 110 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC004866.1-201ENST00000411748 78 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 NCOR1P3-201ENST00000420479 303 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 MTND1P2-201ENST00000430604 821 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 RPS3AP52-201ENST00000435639 297 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 HMGB1P18-201ENST00000438801 619 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms