Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 AC009237.7-201ENST00000447357 229 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 RPS23P5-201ENST00000495419 428 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 AC234781.5-201ENST00000508429 271 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 RNU5F-4P-201ENST00000516581 114 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 MIR5006-201ENST00000583027 110 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 SNORD58B-201ENST00000607313 66 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 U2.1-201ENST00000618978 145 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HMGB4Q8WW32 RNU5F-3P-201ENST00000363767 117 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 RNU6-611P-201ENST00000384276 104 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AL359511.1-201ENST00000402970 211 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 RN7SL297P-201ENST00000483161 293 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 ATP5EP1-201ENST00000510257 156 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 RNU6-667P-201ENST00000517186 102 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC022868.1-201ENST00000517767 391 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 RNU6-988P-201ENST00000519081 107 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC091144.1-201ENST00000519573 138 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC034114.1-201ENST00000520293 285 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC023442.1-201ENST00000531247 422 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC021269.2-201ENST00000532318 330 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 NDUFA5P6-201ENST00000542110 379 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC093023.1-201ENST00000547375 507 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC006600.1-201ENST00000572529 153 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 VN1R91P-201ENST00000594377 169 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 AC083806.3-201ENST00000614016 455 ntBASIC2.49□□□□□ -2.01
HMGB4Q8WW32 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HMGB4Q8WW32 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HMGB4Q8WW32 RNU1-62P-201ENST00000362599 164 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 RNU6-1301P-201ENST00000362724 104 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGB4Q8WW32 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.48□□□□□ -2.01
HMGB4Q8WW32 SNORA25.10-201ENST00000515926 124 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 RNU6-475P-201ENST00000516073 104 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 RNU6-344P-201ENST00000516635 111 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 GNAI2P1-201ENST00000541815 315 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 MIR5188-201ENST00000583467 113 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 AL138825.1-201ENST00000618587 192 ntBASIC2.48□□□□□ -2.01
HMGB4Q8WW32 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
HMGB4Q8WW32 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
HMGB4Q8WW32 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.80-201ENST00000362996 102 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 RNU6-879P-201ENST00000364328 108 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 RNU6-318P-201ENST00000384283 103 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.485-201ENST00000384395 102 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 MIR329-1-201ENST00000385028 80 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 RNU6-1001P-201ENST00000411265 100 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 RNU7-14P-201ENST00000459331 62 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 snoU13.15-201ENST00000459407 104 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 SNORA40.14-201ENST00000516543 86 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 AL442163.3-201ENST00000554110 156 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 AC010999.1-201ENST00000611856 324 ntBASIC2.47□□□□□ -2.01
HMGB4Q8WW32 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
HMGB4Q8WW32 ZNF72P-201ENST00000425869 1908 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGB4Q8WW32 RNA5SP361-201ENST00000362686 118 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.179-201ENST00000363844 90 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.202-201ENST00000364083 110 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 RNU6-743P-201ENST00000364151 106 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 RNU6-793P-201ENST00000384233 104 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 RNU1-148P-201ENST00000384472 162 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AL357139.1-201ENST00000407792 426 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AC007064.1-201ENST00000412238 351 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AL160004.2-201ENST00000432935 350 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 HMGN2P18-201ENST00000450680 270 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AC091179.3-201ENST00000474761 144 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AP003072.1-201ENST00000531740 145 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 CYCSP26-201ENST00000534107 320 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 ANP32BP3-201ENST00000559213 706 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 MIR4648-201ENST00000580107 72 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
HMGB4Q8WW32 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HMGB4Q8WW32 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HMGB4Q8WW32 RNU1-91P-201ENST00000364746 163 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 RNU6-1145P-201ENST00000384246 107 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 SNORA67.2-201ENST00000384300 149 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 RNY3P4-201ENST00000384428 101 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 MIR628-201ENST00000385229 95 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.45□□□□□ -2.02
HMGB4Q8WW32 AL356320.1-201ENST00000429616 163 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms