Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RMST_6.1-201ENST00000611980 203 ntBASIC1.73□□□□□ -2.13
HMGCLP35914 AC025253.1-201ENST00000613623 543 ntBASIC1.73□□□□□ -2.13
HMGCLP35914 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
HMGCLP35914 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGCLP35914 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGCLP35914 MIR340-201ENST00000362125 95 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCLP35914 RNA5SP213-201ENST00000391031 106 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 HMGN2P39-201ENST00000398005 273 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNU6-1050P-201ENST00000410388 107 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNA5SP494-201ENST00000410653 129 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNU2-41P-201ENST00000410991 178 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AL590556.1-201ENST00000423231 483 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 Z82188.1-201ENST00000436709 154 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.72□□□□□ -2.13
HMGCLP35914 snoU13.6-201ENST00000458785 104 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGCLP35914 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGCLP35914 HSBP1P1-201ENST00000555205 166 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 MIR548S-201ENST00000581352 82 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AC005014.2-201ENST00000607795 599 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AL132765.2-201ENST00000610812 351 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGCLP35914 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGCLP35914 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.142-201ENST00000363491 102 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.263-201ENST00000364659 114 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.533-201ENST00000384596 114 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 MIR208B-201ENST00000401172 77 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AL035666.1-201ENST00000446195 348 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 MTND5P20-201ENST00000448677 143 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AL137159.1-201ENST00000452808 512 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 AC016925.1-201ENST00000458303 298 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 snoU13.30-201ENST00000458951 104 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 ATP5EP1-201ENST00000510257 156 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 SNORA4.4-201ENST00000515921 135 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.708-201ENST00000516950 96 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC027288.2-201ENST00000553028 243 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC026470.2-201ENST00000561492 181 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC109446.1-201ENST00000566172 220 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGCLP35914 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC022202.1-201ENST00000613515 211 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGCLP35914 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HMGCLP35914 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGCLP35914 Y_RNA.99-201ENST00000363138 105 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 Y_RNA.404-201ENST00000383978 102 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 SNORA67.2-201ENST00000384300 149 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-601P-201ENST00000384540 107 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 MIR1283-2-201ENST00000408621 87 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC004866.1-201ENST00000411748 78 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 HMGN2P18-201ENST00000450680 270 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGCLP35914 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGCLP35914 RN7SKP210-201ENST00000459176 261 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 FO393415.2-201ENST00000480085 343 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGCLP35914 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-965P-201ENST00000516721 96 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-1098P-201ENST00000516772 96 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGCLP35914 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HMGCLP35914 AC005668.1-201ENST00000571142 476 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC005730.3-201ENST00000583067 366 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 MIR4298-201ENST00000584380 73 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC016727.2-201ENST00000603988 621 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC016727.1-205ENST00000605437 569 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGCLP35914 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HMGCLP35914 RNU6-1188P-201ENST00000363795 107 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 SNORD31B-201ENST00000364977 69 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 MIR29C-201ENST00000385231 88 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 RNU6-1093P-201ENST00000391194 107 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGCLP35914 Z82205.1-201ENST00000428456 297 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 Y_RNA.635-201ENST00000459041 101 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 TOMM22P6-201ENST00000465035 409 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGCLP35914 RNA5SP54-201ENST00000516951 92 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 CBX3P8-201ENST00000532412 525 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC113139.1-201ENST00000605049 239 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC009229.3-201ENST00000608056 282 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 TCL6_2.1-201ENST00000615162 119 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms