Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNA5SP170-201ENST00000517150 101 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 AC079598.5-201ENST00000547460 117 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.79□□□□□ -1.8
NFKB1P19838 MTND5P34-201ENST00000568888 325 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 MIR3160-1-201ENST00000577972 85 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.79□□□□□ -1.8
NFKB1P19838 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NFKB1P19838 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NFKB1P19838 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.78□□□□□ -1.8
NFKB1P19838 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
NFKB1P19838 SNORD32B-201ENST00000364460 84 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 SNORA20B-201ENST00000384220 132 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 SNORA48.7-201ENST00000391302 135 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 AL358232.1-201ENST00000448030 501 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 RNU7-116P-201ENST00000516940 62 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 AC093331.1-201ENST00000521474 169 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 U6.95-201ENST00000636931 70 ntBASIC3.78□□□□□ -1.8
NFKB1P19838 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NFKB1P19838 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
NFKB1P19838 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NFKB1P19838 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NFKB1P19838 AP003122.5-201ENST00000527668 3766 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.77□□□□□ -1.81
NFKB1P19838 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.77□□□□□ -1.81
NFKB1P19838 SNORA27.1-201ENST00000362604 124 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 Y_RNA.280-201ENST00000364765 112 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NFKB1P19838 SNORA40.5-201ENST00000391061 128 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 RNA5SP496-201ENST00000391240 109 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 HSPE1P26-201ENST00000405341 275 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 AC017083.1-201ENST00000428093 483 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 RBMY2UP-201ENST00000453474 324 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 RNU6-437P-201ENST00000459408 95 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 RPS26P55-201ENST00000471178 356 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 RNU5E-3P-201ENST00000515913 68 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 MIR4679-2-201ENST00000578358 77 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 MIR5685-201ENST00000579080 79 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 POLR3GP1-201ENST00000594073 261 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 MIR92B-201ENST00000607575 96 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 AC093732.2-201ENST00000607950 274 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 AL138880.2-201ENST00000616214 239 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.77□□□□□ -1.81
NFKB1P19838 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NFKB1P19838 AL353746.1-201ENST00000566293 6881 ntBASIC3.77□□□□□ -1.81
NFKB1P19838 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NFKB1P19838 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.76□□□□□ -1.81
NFKB1P19838 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NFKB1P19838 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NFKB1P19838 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NFKB1P19838 RNU6-674P-201ENST00000363831 107 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 RNU6-271P-201ENST00000363858 105 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 RN7SKP156-201ENST00000410308 342 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 HMGN2P7-201ENST00000456186 273 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 AL133162.1-201ENST00000463228 453 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.76□□□□□ -1.81
NFKB1P19838 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.76□□□□□ -1.81
NFKB1P19838 RNU6-197P-201ENST00000516680 100 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 RNU6-1098P-201ENST00000516772 96 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 VN1R85P-201ENST00000601587 426 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 AL021707.8-201ENST00000609428 183 ntBASIC3.76□□□□□ -1.81
NFKB1P19838 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
NFKB1P19838 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.76□□□□□ -1.81
NFKB1P19838 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
NFKB1P19838 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NFKB1P19838 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.76□□□□□ -1.81
NFKB1P19838 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
NFKB1P19838 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NFKB1P19838 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.75□□□□□ -1.81
NFKB1P19838 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NFKB1P19838 RNU6-1255P-201ENST00000363434 112 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 RNU6-978P-201ENST00000364371 103 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 AL359837.1-201ENST00000381357 287 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 RNU6-1336P-201ENST00000383886 109 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 Y_RNA.587-201ENST00000391210 103 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 RPL36AP48-201ENST00000485521 314 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 RPL23AP54-201ENST00000495129 419 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 RNU5F-4P-201ENST00000516581 114 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 MIR3121-201ENST00000579680 77 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 AC005972.2-201ENST00000604690 348 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 AC012531.5-201ENST00000611375 151 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.75□□□□□ -1.81
NFKB1P19838 AP000553.6-201ENST00000641242 118 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NFKB1P19838 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NFKB1P19838 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NFKB1P19838 AC002546.1-201ENST00000588041 2504 ntBASIC3.75□□□□□ -1.81
NFKB1P19838 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NFKB1P19838 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NFKB1P19838 SNORA22-201ENST00000383907 134 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 RNU6-484P-201ENST00000384016 107 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 MIR1283-1-201ENST00000408494 87 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 RNU2-55P-201ENST00000411146 174 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 AL135786.1-201ENST00000415892 214 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms