Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC4P09017 AP001025.1-201ENST00000486139 332 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXC4P09017 RNU6-1170P-201ENST00000515974 106 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 RNU6-612P-201ENST00000516909 102 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 AC109479.2-201ENST00000517842 174 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 CBX3P8-201ENST00000532412 525 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 AC090897.2-201ENST00000581715 130 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 MIR1302-2-201ENST00000607096 138 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 AC134503.1-201ENST00000633048 54 ntBASIC1.7□□□□□ -2.14
HOXC4P09017 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.69□□□□□ -2.14
HOXC4P09017 MTND5P10-201ENST00000603719 1809 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC4P09017 SNORD114-19-201ENST00000363072 75 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 Y_RNA.128-201ENST00000363391 112 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 SNORA25B-201ENST00000365507 128 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 RNU6-1040P-201ENST00000383974 107 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 Y_RNA.445-201ENST00000384168 102 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 Y_RNA.463-201ENST00000384271 102 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 Y_RNA.496-201ENST00000384444 101 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 SNORA40.19-201ENST00000390846 128 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 HMGN2P39-201ENST00000398005 273 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL512604.1-201ENST00000404812 257 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AC074117.2-201ENST00000417130 397 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC4P09017 MRPS18CP6-201ENST00000423587 223 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 USMG5P1-201ENST00000425964 177 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL160004.2-201ENST00000432935 350 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL353997.1-201ENST00000432936 108 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC4P09017 AC007969.2-201ENST00000441891 191 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL137792.2-201ENST00000443484 235 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.69□□□□□ -2.14
HOXC4P09017 Y_RNA.631-201ENST00000459607 101 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AC022447.4-201ENST00000504053 364 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AC022493.2-201ENST00000506122 481 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 RNU6-470P-201ENST00000515954 104 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 RNU6-699P-201ENST00000517081 110 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 MIR4287-201ENST00000579398 78 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL031274.2-201ENST00000599419 203 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AC005014.2-201ENST00000607795 599 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AC005296.1-201ENST00000616145 209 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.69□□□□□ -2.14
HOXC4P09017 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.69□□□□□ -2.14
HOXC4P09017 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC4P09017 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.68□□□□□ -2.14
HOXC4P09017 SNORA22B-201ENST00000383876 138 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 RNU6-933P-201ENST00000384424 107 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 RNA5SP213-201ENST00000391031 106 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 HMGN2P19-201ENST00000425149 265 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC4P09017 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 DAP3P1-201ENST00000441522 278 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 MED28P2-201ENST00000475771 317 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AL163540.1-201ENST00000485382 386 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 Y_RNA.711-201ENST00000516993 102 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AC034114.1-201ENST00000520293 285 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.68□□□□□ -2.14
HOXC4P09017 MRPS36P4-201ENST00000534436 298 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 CR383656.8-201ENST00000549046 145 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC4P09017 AC026271.5-201ENST00000577873 130 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC4P09017 AL109918.3-201ENST00000603072 338 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AP001836.1-201ENST00000604675 523 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 MIR8076-201ENST00000611401 83 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AC040896.1-201ENST00000613819 479 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 AC007485.1-201ENST00000616755 206 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 MIR3529-201ENST00000637713 78 ntBASIC1.68□□□□□ -2.14
HOXC4P09017 Y_RNA.123-201ENST00000363338 102 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 RNY3P11-201ENST00000364153 102 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 RNU6-596P-201ENST00000365395 98 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 RNU1-57P-201ENST00000384491 166 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 AC018865.2-201ENST00000423631 129 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXC4P09017 AC012308.1-201ENST00000451232 178 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 AC079354.2-201ENST00000453523 154 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 SNRPGP7-201ENST00000469016 106 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 RPL30P12-201ENST00000474666 353 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 ACA59.1-201ENST00000515966 143 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 RNU6-1137P-201ENST00000517073 99 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 AC109329.1-201ENST00000518744 317 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXC4P09017 AC104581.2-201ENST00000572227 430 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 MIR4273-201ENST00000582824 84 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 AC078795.3-201ENST00000602913 472 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 AC073410.2-201ENST00000603240 332 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 Y_RNA.812-201ENST00000610788 101 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 Y_RNA.784-201ENST00000613803 101 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 Y_RNA.787-201ENST00000616522 101 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 Y_RNA.780-201ENST00000617336 101 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 Y_RNA.801-201ENST00000619005 101 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXC4P09017 RBBP8P1-201ENST00000449447 1844 ntBASIC1.67□□□□□ -2.14
HOXC4P09017 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms