Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 uc_338.22-201ENST00000622722 187 ntBASIC-0.79□□□□□ -2.54
GAFA1Q96PS6 AP000568.1-201ENST00000282964 442 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 MTCYBP39-201ENST00000437562 491 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 MTND4P25-201ENST00000441039 533 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC005042.3-201ENST00000453230 174 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 RNU4-49P-201ENST00000516080 140 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 RNU2-34P-201ENST00000516534 121 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 RNU6-782P-201ENST00000516852 104 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 MIR1273C-201ENST00000578669 77 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC104073.3-201ENST00000610942 955 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC253576.2-201ENST00000618815 580 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 AC093875.1-201ENST00000623688 504 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 U6.108-201ENST00000637764 58 ntBASIC-0.8□□□□□ -2.54
GAFA1Q96PS6 RNU1-76P-201ENST00000362903 159 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 RNU6-142P-201ENST00000384019 107 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 MRPL42P3-201ENST00000401492 326 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AC107401.1-201ENST00000503426 685 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AC026782.1-201ENST00000512952 449 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 RNU6-758P-201ENST00000516292 89 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AL162424.1-201ENST00000602325 221 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 7SK.7-201ENST00000603504 247 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AC098679.4-201ENST00000624241 654 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 AL450472.1-202ENST00000637286 180 ntBASIC-0.81□□□□□ -2.54
GAFA1Q96PS6 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 RNU6-35P-201ENST00000384530 107 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 RNU6-417P-201ENST00000384712 107 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 RNA5SP201-201ENST00000410316 124 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AC006366.1-201ENST00000422002 759 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AC245047.3-201ENST00000429428 127 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 HMGN1P33-201ENST00000432945 451 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AP000870.1-201ENST00000472927 406 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AC109445.1-201ENST00000512356 383 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 RNU7-129P-201ENST00000516128 62 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.82□□□□□ -2.54
GAFA1Q96PS6 MIR412-201ENST00000362142 91 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 RNU6-216P-201ENST00000363282 104 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 SNORA27.3-201ENST00000364937 134 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 AC083799.1-201ENST00000366451 910 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 RNU6-46P-201ENST00000383860 107 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 SNORD65C-201ENST00000390962 71 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 Z95118.1-201ENST00000421372 247 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 AC007547.1-201ENST00000462177 490 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 AC091021.1-201ENST00000468051 388 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 RNU2-46P-201ENST00000517038 113 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 OR8K2P-201ENST00000524645 927 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 ZNF321P-202ENST00000550843 495 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 AC108676.2-201ENST00000605225 163 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 AL356596.1-201ENST00000624230 379 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 SNORD98-201ENST00000636377 67 ntBASIC-0.83□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 RNU6-161P-201ENST00000363051 106 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 RNU4-9P-201ENST00000364951 139 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 RNU6-395P-201ENST00000365662 106 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AL627311.1-201ENST00000431514 115 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AC093850.1-201ENST00000454121 251 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 MTND1P36-201ENST00000522384 936 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AC007751.1-201ENST00000529260 376 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 MIR4666A-201ENST00000580160 79 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 AC096720.1-201ENST00000604441 183 ntBASIC-0.84□□□□□ -2.54
GAFA1Q96PS6 SNORA36.1-201ENST00000363424 132 ntBASIC-0.85□□□□□ -2.55
GAFA1Q96PS6 RNU6-424P-201ENST00000384367 105 ntBASIC-0.85□□□□□ -2.55
GAFA1Q96PS6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.85□□□□□ -2.55
GAFA1Q96PS6 RNU6-796P-201ENST00000391086 107 ntBASIC-0.85□□□□□ -2.55
GAFA1Q96PS6 CDK8P2-201ENST00000415020 547 ntBASIC-0.85□□□□□ -2.55
GAFA1Q96PS6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms