Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN4AP35499 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN4AP35499 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN4AP35499 SNRPGP7-201ENST00000469016 106 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN4AP35499 AC022254.1-201ENST00000567857 235 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 MIR4424-201ENST00000585257 86 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 MIR5692C1-201ENST00000585309 91 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN4AP35499 RNU6-85P-201ENST00000605989 107 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 AC007684.1-201ENST00000609671 477 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 DISC2.1-201ENST00000612827 205 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 AC007014.2-201ENST00000615581 479 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SCN4AP35499 RNU6-212P-201ENST00000362642 104 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 RNY3P3-201ENST00000363816 102 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 Y_RNA.436-201ENST00000384097 102 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 MIR193B-201ENST00000384907 83 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 MIR186-201ENST00000384988 86 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 MIR181A1-201ENST00000385026 110 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN4AP35499 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN4AP35499 AC073415.1-201ENST00000449240 153 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 C1DP4-201ENST00000455429 424 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 RNU7-167P-201ENST00000459160 62 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AC087884.1-201ENST00000469738 328 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 RPS3AP17-201ENST00000472594 777 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN4AP35499 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.2□□□□□ -2.22
SCN4AP35499 SNORA19.2-201ENST00000516013 114 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 RNU5F-4P-201ENST00000516581 114 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AC104576.1-201ENST00000524225 88 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 MIR3973-201ENST00000579824 107 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN4AP35499 AL109918.3-201ENST00000603072 338 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN4AP35499 AL773524.1-201ENST00000614065 229 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 uc_338.34-201ENST00000617467 174 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 AC103705.1-201ENST00000619013 241 ntBASIC1.2□□□□□ -2.22
SCN4AP35499 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SCN4AP35499 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SCN4AP35499 Y_RNA.38-201ENST00000362617 102 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-827P-201ENST00000365553 106 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 SNORA69-201ENST00000383895 132 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-784P-201ENST00000384330 106 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 Y_RNA.582-201ENST00000391023 95 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC021146.2-201ENST00000504736 556 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-506P-201ENST00000516553 94 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-567P-201ENST00000516746 107 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-430P-201ENST00000517078 107 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN4AP35499 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN4AP35499 HMGB1P33-201ENST00000563485 527 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC078795.3-201ENST00000602913 472 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 CYP2C61P-201ENST00000604072 290 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AL590095.2-201ENST00000604136 117 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AP000654.2-201ENST00000605633 586 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC092807.2-201ENST00000609367 243 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 MIR1248-201ENST00000629190 106 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AL450472.1-202ENST00000637286 180 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN4AP35499 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SCN4AP35499 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SCN4AP35499 MIR126-201ENST00000362291 85 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-562P-201ENST00000362731 107 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-862P-201ENST00000362804 105 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU2-41P-201ENST00000410991 178 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN4AP35499 VN1R36P-201ENST00000414936 291 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AL353193.1-201ENST00000421444 268 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-1208P-201ENST00000459588 107 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC010409.1-201ENST00000487382 476 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN4AP35499 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-970P-201ENST00000516312 107 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNU6-1332P-201ENST00000516666 104 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 RNA5SP54-201ENST00000516951 92 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 MTND1P35-201ENST00000526739 508 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN4AP35499 MIR3198-2-201ENST00000577868 80 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 MIR5696-201ENST00000578474 85 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN4AP35499 AP001330.5-201ENST00000607176 411 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC008555.8-201ENST00000623602 2168 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 AC090517.3-201ENST00000625170 141 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
SCN4AP35499 AC009541.1-201ENST00000438279 2662 ntBASIC1.19□□□□□ -2.22
SCN4AP35499 SNORA25B-201ENST00000365507 128 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 RNU6-483P-201ENST00000384088 108 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 SNORD37.1-201ENST00000390968 65 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN4AP35499 AC139712.2-201ENST00000424302 339 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 MTCO2P7-201ENST00000446518 666 ntBASIC1.18□□□□□ -2.22
SCN4AP35499 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms