Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNU6-1266P-201ENST00000362794 105 ntBASIC3.05□□□□□ -1.92
PTX3P26022 Y_RNA.136-201ENST00000363444 102 ntBASIC3.05□□□□□ -1.92
PTX3P26022 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.05□□□□□ -1.92
PTX3P26022 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PTX3P26022 AL603910.2-201ENST00000407268 136 ntBASIC3.05□□□□□ -1.92
PTX3P26022 MIR1294-201ENST00000408503 142 ntBASIC3.05□□□□□ -1.92
PTX3P26022 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.05□□□□□ -1.92
PTX3P26022 AC104332.2-201ENST00000429959 156 ntBASIC3.05□□□□□ -1.92
PTX3P26022 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.05□□□□□ -1.92
PTX3P26022 AC083906.5-201ENST00000503722 328 ntBASIC3.05□□□□□ -1.92
PTX3P26022 SCARNA24.2-201ENST00000516968 130 ntBASIC3.05□□□□□ -1.92
PTX3P26022 RNU6-111P-201ENST00000517179 105 ntBASIC3.05□□□□□ -1.92
PTX3P26022 RNU6-586P-201ENST00000517265 104 ntBASIC3.05□□□□□ -1.92
PTX3P26022 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.05□□□□□ -1.92
PTX3P26022 AC018630.3-201ENST00000542637 96 ntBASIC3.05□□□□□ -1.92
PTX3P26022 MIR4444-1-201ENST00000581696 74 ntBASIC3.05□□□□□ -1.92
PTX3P26022 MIR4444-2-201ENST00000584390 74 ntBASIC3.05□□□□□ -1.92
PTX3P26022 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.05□□□□□ -1.92
PTX3P26022 AC069294.1-201ENST00000608397 350 ntBASIC3.05□□□□□ -1.92
PTX3P26022 uc_338.25-201ENST00000613756 156 ntBASIC3.05□□□□□ -1.92
PTX3P26022 AC004467.1-201ENST00000615678 330 ntBASIC3.05□□□□□ -1.92
PTX3P26022 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
PTX3P26022 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTX3P26022 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.04□□□□□ -1.92
PTX3P26022 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTX3P26022 U3.8-201ENST00000363675 217 ntBASIC3.04□□□□□ -1.92
PTX3P26022 SNORD27-201ENST00000363981 72 ntBASIC3.04□□□□□ -1.92
PTX3P26022 SNORA51.4-201ENST00000364993 124 ntBASIC3.04□□□□□ -1.92
PTX3P26022 SNORA67.2-201ENST00000384300 149 ntBASIC3.04□□□□□ -1.92
PTX3P26022 RNU6-1026P-201ENST00000384465 108 ntBASIC3.04□□□□□ -1.92
PTX3P26022 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
PTX3P26022 RNU2-54P-201ENST00000410299 190 ntBASIC3.04□□□□□ -1.92
PTX3P26022 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
PTX3P26022 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
PTX3P26022 POLR2KP2-201ENST00000438155 177 ntBASIC3.04□□□□□ -1.92
PTX3P26022 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
PTX3P26022 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
PTX3P26022 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
PTX3P26022 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.04□□□□□ -1.92
PTX3P26022 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.04□□□□□ -1.92
PTX3P26022 AC055872.1-201ENST00000570978 278 ntBASIC3.04□□□□□ -1.92
PTX3P26022 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.04□□□□□ -1.92
PTX3P26022 MIR3199-1-201ENST00000582434 88 ntBASIC3.04□□□□□ -1.92
PTX3P26022 AL713866.2-201ENST00000603579 219 ntBASIC3.04□□□□□ -1.92
PTX3P26022 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.04□□□□□ -1.92
PTX3P26022 MIR6075-201ENST00000620782 95 ntBASIC3.04□□□□□ -1.92
PTX3P26022 IGHVIII-44-202ENST00000636235 289 ntBASIC3.04□□□□□ -1.92
PTX3P26022 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.04□□□□□ -1.92
PTX3P26022 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.03□□□□□ -1.92
PTX3P26022 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PTX3P26022 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PTX3P26022 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTX3P26022 SNORA25.1-201ENST00000362326 128 ntBASIC3.03□□□□□ -1.92
PTX3P26022 RNU6-1274P-201ENST00000384557 107 ntBASIC3.03□□□□□ -1.92
PTX3P26022 SNORA46-201ENST00000384762 135 ntBASIC3.03□□□□□ -1.92
PTX3P26022 MIR586-201ENST00000385035 97 ntBASIC3.03□□□□□ -1.92
PTX3P26022 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
PTX3P26022 RNA5SP504-201ENST00000410676 117 ntBASIC3.03□□□□□ -1.92
PTX3P26022 AL139281.1-201ENST00000422120 335 ntBASIC3.03□□□□□ -1.92
PTX3P26022 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
PTX3P26022 TOMM22P2-201ENST00000430735 237 ntBASIC3.03□□□□□ -1.92
PTX3P26022 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.03□□□□□ -1.92
PTX3P26022 AC006028.1-201ENST00000438379 402 ntBASIC3.03□□□□□ -1.92
PTX3P26022 RPL21P129-201ENST00000491732 478 ntBASIC3.03□□□□□ -1.92
PTX3P26022 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.03□□□□□ -1.92
PTX3P26022 RNU4-71P-201ENST00000516258 113 ntBASIC3.03□□□□□ -1.92
PTX3P26022 RNU5F-4P-201ENST00000516581 114 ntBASIC3.03□□□□□ -1.92
PTX3P26022 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
PTX3P26022 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.03□□□□□ -1.92
PTX3P26022 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.03□□□□□ -1.92
PTX3P26022 AC010900.2-201ENST00000604508 210 ntBASIC3.03□□□□□ -1.92
PTX3P26022 MIR5739-201ENST00000619803 80 ntBASIC3.03□□□□□ -1.92
PTX3P26022 AC091932.3-201ENST00000624223 323 ntBASIC3.03□□□□□ -1.92
PTX3P26022 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTX3P26022 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTX3P26022 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTX3P26022 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTX3P26022 AC080128.1-201ENST00000474389 1917 ntBASIC3.03□□□□□ -1.92
PTX3P26022 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTX3P26022 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTX3P26022 Y_RNA.44-201ENST00000362676 108 ntBASIC3.02□□□□□ -1.93
PTX3P26022 Y_RNA.54-201ENST00000362766 105 ntBASIC3.02□□□□□ -1.93
PTX3P26022 RNY1-201ENST00000364228 113 ntBASIC3.02□□□□□ -1.93
PTX3P26022 RNA5SP72-201ENST00000364442 117 ntBASIC3.02□□□□□ -1.93
PTX3P26022 Y_RNA.383-201ENST00000383855 97 ntBASIC3.02□□□□□ -1.93
PTX3P26022 Y_RNA.446-201ENST00000384178 104 ntBASIC3.02□□□□□ -1.93
PTX3P26022 RNU6-514P-201ENST00000384208 107 ntBASIC3.02□□□□□ -1.93
PTX3P26022 Y_RNA.539-201ENST00000384635 107 ntBASIC3.02□□□□□ -1.93
PTX3P26022 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
PTX3P26022 Z98949.2-201ENST00000440996 144 ntBASIC3.02□□□□□ -1.93
PTX3P26022 AC091153.1-201ENST00000466297 402 ntBASIC3.02□□□□□ -1.93
PTX3P26022 AC109925.1-201ENST00000478069 331 ntBASIC3.02□□□□□ -1.93
PTX3P26022 RNU6-107P-201ENST00000516643 102 ntBASIC3.02□□□□□ -1.93
PTX3P26022 RNU1-117P-201ENST00000517041 158 ntBASIC3.02□□□□□ -1.93
PTX3P26022 AC006380.1-201ENST00000603598 186 ntBASIC3.02□□□□□ -1.93
PTX3P26022 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.02□□□□□ -1.93
PTX3P26022 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTX3P26022 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
PTX3P26022 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PTX3P26022 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms