Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP3P08254 AC090515.1-201ENST00000465295 476 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC145146.1-201ENST00000496370 254 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP3P08254 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP3P08254 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.51□□□□□ -2.01
MMP3P08254 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.51□□□□□ -2.01
MMP3P08254 AL442663.2-201ENST00000554385 511 ntBASIC2.51□□□□□ -2.01
MMP3P08254 UBL5P4-201ENST00000562584 236 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC104581.2-201ENST00000572227 430 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC006600.1-201ENST00000572529 153 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC090616.3-201ENST00000582184 217 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AL360085.1-201ENST00000604713 532 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC138305.3-201ENST00000624988 240 ntBASIC2.51□□□□□ -2.01
MMP3P08254 MIR4272-201ENST00000635924 64 ntBASIC2.51□□□□□ -2.01
MMP3P08254 RNA5SP99-201ENST00000364020 114 ntBASIC2.5□□□□□ -2.01
MMP3P08254 RNU6-450P-201ENST00000364654 107 ntBASIC2.5□□□□□ -2.01
MMP3P08254 RNU6-378P-201ENST00000384324 107 ntBASIC2.5□□□□□ -2.01
MMP3P08254 Y_RNA.527-201ENST00000384573 102 ntBASIC2.5□□□□□ -2.01
MMP3P08254 MIR606-201ENST00000384851 96 ntBASIC2.5□□□□□ -2.01
MMP3P08254 CBX3P9-201ENST00000402326 552 ntBASIC2.5□□□□□ -2.01
MMP3P08254 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
MMP3P08254 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
MMP3P08254 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.5□□□□□ -2.01
MMP3P08254 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.5□□□□□ -2.01
MMP3P08254 AP000870.1-201ENST00000472927 406 ntBASIC2.5□□□□□ -2.01
MMP3P08254 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
MMP3P08254 RNU6-548P-201ENST00000517083 115 ntBASIC2.5□□□□□ -2.01
MMP3P08254 AC109329.1-201ENST00000518744 317 ntBASIC2.5□□□□□ -2.01
MMP3P08254 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.5□□□□□ -2.01
MMP3P08254 AL132822.1-201ENST00000617063 513 ntBASIC2.5□□□□□ -2.01
MMP3P08254 FO624990.1-201ENST00000636373 85 ntBASIC2.5□□□□□ -2.01
MMP3P08254 MTND5P16-201ENST00000460269 1703 ntBASIC2.5□□□□□ -2.01
MMP3P08254 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
MMP3P08254 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.5□□□□□ -2.01
MMP3P08254 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.5□□□□□ -2.01
MMP3P08254 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MMP3P08254 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
MMP3P08254 Y_RNA.39-201ENST00000362620 98 ntBASIC2.49□□□□□ -2.01
MMP3P08254 RNU6-708P-201ENST00000384217 107 ntBASIC2.49□□□□□ -2.01
MMP3P08254 RNU6-17P-201ENST00000384245 107 ntBASIC2.49□□□□□ -2.01
MMP3P08254 RNU6-18P-201ENST00000384527 107 ntBASIC2.49□□□□□ -2.01
MMP3P08254 SNORA69.1-201ENST00000390904 137 ntBASIC2.49□□□□□ -2.01
MMP3P08254 RNU6-1093P-201ENST00000391194 107 ntBASIC2.49□□□□□ -2.01
MMP3P08254 MRPL42P3-201ENST00000401492 326 ntBASIC2.49□□□□□ -2.01
MMP3P08254 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.49□□□□□ -2.01
MMP3P08254 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.49□□□□□ -2.01
MMP3P08254 RPS15AP7-201ENST00000439294 405 ntBASIC2.49□□□□□ -2.01
MMP3P08254 AC023141.11-201ENST00000508864 202 ntBASIC2.49□□□□□ -2.01
MMP3P08254 SNORA25.10-201ENST00000515926 124 ntBASIC2.49□□□□□ -2.01
MMP3P08254 RNU6-991P-201ENST00000516168 107 ntBASIC2.49□□□□□ -2.01
MMP3P08254 RNU7-4P-201ENST00000516961 62 ntBASIC2.49□□□□□ -2.01
MMP3P08254 COX6CP5-201ENST00000527162 228 ntBASIC2.49□□□□□ -2.01
MMP3P08254 AC016256.1-201ENST00000547971 354 ntBASIC2.49□□□□□ -2.01
MMP3P08254 AC027288.2-201ENST00000553028 243 ntBASIC2.49□□□□□ -2.01
MMP3P08254 HSBP1P1-201ENST00000555205 166 ntBASIC2.49□□□□□ -2.01
MMP3P08254 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.49□□□□□ -2.01
MMP3P08254 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
MMP3P08254 MIR4680-201ENST00000580906 66 ntBASIC2.49□□□□□ -2.01
MMP3P08254 MIR3136-201ENST00000583498 78 ntBASIC2.49□□□□□ -2.01
MMP3P08254 AL670379.2-201ENST00000604983 252 ntBASIC2.49□□□□□ -2.01
MMP3P08254 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.49□□□□□ -2.01
MMP3P08254 AL606534.2-204ENST00000635008 178 ntBASIC2.49□□□□□ -2.01
MMP3P08254 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
MMP3P08254 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.48□□□□□ -2.01
MMP3P08254 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
MMP3P08254 Y_RNA.162-201ENST00000363683 102 ntBASIC2.48□□□□□ -2.01
MMP3P08254 SNORD115-32-201ENST00000364079 82 ntBASIC2.48□□□□□ -2.01
MMP3P08254 RNU6-461P-201ENST00000364195 107 ntBASIC2.48□□□□□ -2.01
MMP3P08254 RNU4-56P-201ENST00000364700 142 ntBASIC2.48□□□□□ -2.01
MMP3P08254 Y_RNA.319-201ENST00000365138 92 ntBASIC2.48□□□□□ -2.01
MMP3P08254 RNU1-115P-201ENST00000365329 160 ntBASIC2.48□□□□□ -2.01
MMP3P08254 Y_RNA.557-201ENST00000384680 107 ntBASIC2.48□□□□□ -2.01
MMP3P08254 MIR153-2-201ENST00000385225 87 ntBASIC2.48□□□□□ -2.01
MMP3P08254 SNORA46.1-201ENST00000391069 153 ntBASIC2.48□□□□□ -2.01
MMP3P08254 Y_RNA.645-201ENST00000391229 102 ntBASIC2.48□□□□□ -2.01
MMP3P08254 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.48□□□□□ -2.01
MMP3P08254 Y_RNA.592-201ENST00000410274 109 ntBASIC2.48□□□□□ -2.01
MMP3P08254 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.48□□□□□ -2.01
MMP3P08254 MTND2P23-201ENST00000422990 651 ntBASIC2.48□□□□□ -2.01
MMP3P08254 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.48□□□□□ -2.01
MMP3P08254 AL603825.1-201ENST00000438481 80 ntBASIC2.48□□□□□ -2.01
MMP3P08254 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.48□□□□□ -2.01
MMP3P08254 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.48□□□□□ -2.01
MMP3P08254 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
MMP3P08254 SCARNA3-201ENST00000517097 143 ntBASIC2.48□□□□□ -2.01
MMP3P08254 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MMP3P08254 CYP4A27P-201ENST00000567218 190 ntBASIC2.48□□□□□ -2.01
MMP3P08254 MIR3923-201ENST00000579521 83 ntBASIC2.48□□□□□ -2.01
MMP3P08254 AC105245.1-201ENST00000581934 244 ntBASIC2.48□□□□□ -2.01
MMP3P08254 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.48□□□□□ -2.01
MMP3P08254 RMST_6.1-201ENST00000611980 203 ntBASIC2.48□□□□□ -2.01
MMP3P08254 AC092881.1-201ENST00000638218 2733 ntBASIC2.48□□□□□ -2.01
MMP3P08254 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MMP3P08254 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MMP3P08254 AC005592.1-201ENST00000566527 1640 ntBASIC2.47□□□□□ -2.01
MMP3P08254 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MMP3P08254 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.47□□□□□ -2.01
MMP3P08254 SET-203ENST00000372688 801 ntTSL 2 BASIC2.47□□□□□ -2.01
MMP3P08254 RNU6-639P-201ENST00000384074 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms