Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC104465.1-201ENST00000611365 139 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC132825.6-201ENST00000638861 357 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 CEP170P1-201ENST00000502249 4587 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.34□□□□□ -1.88
PTCHD1Q96NR3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 Y_RNA.8-201ENST00000362353 102 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 MTCO2P33-201ENST00000402100 465 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 RNU6-394P-201ENST00000410735 107 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 DBIP2-201ENST00000419076 262 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 CYCSP4-201ENST00000429682 331 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 TMSB4XP3-201ENST00000445144 114 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 RNU7-200P-201ENST00000516105 62 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 HSPE1P18-201ENST00000517602 280 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 MIR3944-201ENST00000581277 108 ntBASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD1Q96NR3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 RNA5SP171-201ENST00000391071 115 ntBASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 Y_RNA.637-201ENST00000459424 114 ntBASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 MTND5P41-201ENST00000517498 206 ntBASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
PTCHD1Q96NR3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 SNORA71.3-201ENST00000362582 128 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 Y_RNA.571-201ENST00000384753 98 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 MIR7-3-201ENST00000384898 110 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 MIR767-201ENST00000390228 109 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 RNU6-1135P-201ENST00000411083 103 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 YME1L1P1-201ENST00000429435 297 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 TOMM22P2-201ENST00000430735 237 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 RNU6-346P-201ENST00000516288 111 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 MIR7153-201ENST00000637758 57 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
PTCHD1Q96NR3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC103988.1-201ENST00000566382 2177 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 RNU1-105P-201ENST00000363470 161 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 SNORD115-30-201ENST00000364117 82 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 Y_RNA.398-201ENST00000383952 99 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 Y_RNA.441-201ENST00000384123 112 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 RNU6-763P-201ENST00000390865 106 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 SNORA12-201ENST00000391162 147 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AL031003.1-201ENST00000404229 172 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AL451074.5-201ENST00000415894 435 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 Z98742.2-201ENST00000431564 187 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AL358232.1-201ENST00000448030 501 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 CYCSP35-201ENST00000451978 304 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC025518.1-201ENST00000479856 347 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 RN7SL293P-201ENST00000481765 281 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC006445.1-201ENST00000491925 405 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC108706.1-201ENST00000611053 297 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 AC019176.2-201ENST00000611579 315 ntBASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PTCHD1Q96NR3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCHD1Q96NR3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms