Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORD116-13-201ENST00000384408 92 ntBASIC0.4□□□□□ -2.35
TPM4P67936 MIR549A-201ENST00000385268 96 ntBASIC0.4□□□□□ -2.35
TPM4P67936 MRPL42P2-201ENST00000403169 426 ntBASIC0.4□□□□□ -2.35
TPM4P67936 MIR1253-201ENST00000408273 105 ntBASIC0.4□□□□□ -2.35
TPM4P67936 MTATP6P16-201ENST00000434543 526 ntBASIC0.4□□□□□ -2.35
TPM4P67936 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.4□□□□□ -2.35
TPM4P67936 AC116562.3-201ENST00000506136 177 ntBASIC0.4□□□□□ -2.35
TPM4P67936 RNU1-142P-201ENST00000516682 145 ntBASIC0.4□□□□□ -2.35
TPM4P67936 AC068587.5-201ENST00000528506 175 ntBASIC0.4□□□□□ -2.35
TPM4P67936 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.4□□□□□ -2.35
TPM4P67936 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.4□□□□□ -2.35
TPM4P67936 MIR4781-201ENST00000585250 76 ntBASIC0.4□□□□□ -2.35
TPM4P67936 AC091805.2-201ENST00000603848 235 ntBASIC0.4□□□□□ -2.35
TPM4P67936 AL121992.2-201ENST00000606262 256 ntBASIC0.4□□□□□ -2.35
TPM4P67936 AC104010.1-201ENST00000616889 150 ntBASIC0.4□□□□□ -2.35
TPM4P67936 AC073349.3-201ENST00000617616 186 ntBASIC0.4□□□□□ -2.35
TPM4P67936 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
TPM4P67936 RNU6-715P-201ENST00000365204 103 ntBASIC0.39□□□□□ -2.35
TPM4P67936 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TPM4P67936 SNORA75.2-201ENST00000391138 150 ntBASIC0.39□□□□□ -2.35
TPM4P67936 SNORA75.3-201ENST00000391231 150 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AL031577.2-201ENST00000404133 280 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AL034345.1-201ENST00000407768 123 ntBASIC0.39□□□□□ -2.35
TPM4P67936 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.39□□□□□ -2.35
TPM4P67936 AL606662.1-201ENST00000445763 553 ntBASIC0.39□□□□□ -2.35
TPM4P67936 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.39□□□□□ -2.35
TPM4P67936 RPL39P39-201ENST00000455840 151 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AL049830.1-201ENST00000468034 425 ntBASIC0.39□□□□□ -2.35
TPM4P67936 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.39□□□□□ -2.35
TPM4P67936 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
TPM4P67936 FAM106DP-201ENST00000586416 501 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AL357312.1-201ENST00000603879 298 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AL139418.1-201ENST00000613613 177 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AC005562.2-201ENST00000618264 111 ntBASIC0.39□□□□□ -2.35
TPM4P67936 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.39□□□□□ -2.35
TPM4P67936 AC138649.3-201ENST00000622154 254 ntBASIC0.39□□□□□ -2.35
TPM4P67936 MTND4P5-201ENST00000435821 1374 ntBASIC0.39□□□□□ -2.35
TPM4P67936 RNU6-199P-201ENST00000362954 107 ntBASIC0.38□□□□□ -2.35
TPM4P67936 RNU6-1335P-201ENST00000365426 107 ntBASIC0.38□□□□□ -2.35
TPM4P67936 RNU6-157P-201ENST00000383957 107 ntBASIC0.38□□□□□ -2.35
TPM4P67936 RNU6-440P-201ENST00000390882 105 ntBASIC0.38□□□□□ -2.35
TPM4P67936 AL451046.2-201ENST00000403074 277 ntBASIC0.38□□□□□ -2.35
TPM4P67936 AL355796.1-201ENST00000406706 323 ntBASIC0.38□□□□□ -2.35
TPM4P67936 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
TPM4P67936 AC092423.1-201ENST00000430165 186 ntBASIC0.38□□□□□ -2.35
TPM4P67936 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.38□□□□□ -2.35
TPM4P67936 AC079382.1-201ENST00000493346 557 ntBASIC0.38□□□□□ -2.35
TPM4P67936 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.38□□□□□ -2.35
TPM4P67936 PRELID3BP2-201ENST00000605362 201 ntBASIC0.38□□□□□ -2.35
TPM4P67936 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
TPM4P67936 OR4G1P-203ENST00000641984 1631 ntBASIC0.38□□□□□ -2.35
TPM4P67936 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TPM4P67936 MIR337-201ENST00000362281 93 ntBASIC0.37□□□□□ -2.35
TPM4P67936 Y_RNA.18-201ENST00000362461 102 ntBASIC0.37□□□□□ -2.35
TPM4P67936 RNU4-48P-201ENST00000365559 182 ntBASIC0.37□□□□□ -2.35
TPM4P67936 RNU6-550P-201ENST00000391057 101 ntBASIC0.37□□□□□ -2.35
TPM4P67936 Y_RNA.608-201ENST00000410647 95 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AL356583.2-201ENST00000426536 280 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AC245047.3-201ENST00000429428 127 ntBASIC0.37□□□□□ -2.35
TPM4P67936 NFU1P2-201ENST00000448700 469 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AC233266.1-201ENST00000454518 96 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AK3P2-201ENST00000507976 429 ntBASIC0.37□□□□□ -2.35
TPM4P67936 SNORA70.12-201ENST00000516084 153 ntBASIC0.37□□□□□ -2.35
TPM4P67936 RNU6-1178P-201ENST00000516674 107 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AC103996.1-201ENST00000555468 102 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AL360219.1-201ENST00000610230 366 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AC242852.1-201ENST00000612151 96 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AL359075.3-201ENST00000613288 217 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AC244015.1-201ENST00000622301 99 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AL138960.2-201ENST00000625145 535 ntBASIC0.37□□□□□ -2.35
TPM4P67936 AC134026.1-201ENST00000623249 2239 ntBASIC0.37□□□□□ -2.35
TPM4P67936 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
TPM4P67936 RNU6-660P-201ENST00000364566 109 ntBASIC0.36□□□□□ -2.35
TPM4P67936 SNORA16.2-201ENST00000390991 127 ntBASIC0.36□□□□□ -2.35
TPM4P67936 RNU6-1242P-201ENST00000391052 103 ntBASIC0.36□□□□□ -2.35
TPM4P67936 MRPL42P3-201ENST00000401492 326 ntBASIC0.36□□□□□ -2.35
TPM4P67936 EXOSC3P1-201ENST00000448649 500 ntBASIC0.36□□□□□ -2.35
TPM4P67936 USP9YP25-201ENST00000457708 443 ntBASIC0.36□□□□□ -2.35
TPM4P67936 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.36□□□□□ -2.35
TPM4P67936 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.36□□□□□ -2.35
TPM4P67936 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.36□□□□□ -2.35
TPM4P67936 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.36□□□□□ -2.35
TPM4P67936 AC022616.3-201ENST00000523940 148 ntBASIC0.36□□□□□ -2.35
TPM4P67936 AC026470.2-201ENST00000561492 181 ntBASIC0.36□□□□□ -2.35
TPM4P67936 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.36□□□□□ -2.35
TPM4P67936 MIR4778-201ENST00000577635 80 ntBASIC0.36□□□□□ -2.35
TPM4P67936 MIR4769-201ENST00000584126 77 ntBASIC0.36□□□□□ -2.35
TPM4P67936 AC069431.2-201ENST00000604149 1099 ntBASIC0.36□□□□□ -2.35
TPM4P67936 RNU6-827P-201ENST00000365553 106 ntBASIC0.35□□□□□ -2.35
TPM4P67936 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.35□□□□□ -2.35
TPM4P67936 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
TPM4P67936 SNORD99-201ENST00000408612 74 ntBASIC0.35□□□□□ -2.35
TPM4P67936 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM4P67936 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.35□□□□□ -2.35
TPM4P67936 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM4P67936 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM4P67936 AL031274.1-201ENST00000450334 232 ntBASIC0.35□□□□□ -2.35
TPM4P67936 RNU6-917P-201ENST00000516294 104 ntBASIC0.35□□□□□ -2.35
TPM4P67936 AC025627.3-201ENST00000582078 182 ntBASIC0.35□□□□□ -2.35
TPM4P67936 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms