Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RNU6-1301P-201ENST00000362724 104 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-245P-201ENST00000384020 107 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-281P-201ENST00000384212 103 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 SNORA51.11-201ENST00000384442 131 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 MIR512-1-201ENST00000384913 84 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 MIR208B-201ENST00000401172 77 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC083906.5-201ENST00000503722 328 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 MTCO2P24-201ENST00000515611 426 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC022868.1-201ENST00000517767 391 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 RPL30P11-203ENST00000598995 310 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC010620.2-201ENST00000600135 313 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC005296.1-201ENST00000616145 209 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 AC010205.1-201ENST00000616668 449 ntBASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.79□□□□□ -1.96
PTCHD3Q3KNS1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-1309P-201ENST00000363305 108 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 U3.9-201ENST00000363823 204 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-450P-201ENST00000364654 107 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-378P-201ENST00000384324 107 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 RNU6-851P-201ENST00000384565 107 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 MIR29B2-201ENST00000385055 81 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 MIR320B2-201ENST00000408479 138 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 DPH3P2-201ENST00000422618 250 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 SDAD1P3-201ENST00000427380 333 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 WARS2P1-201ENST00000429678 537 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 RPS29P6-201ENST00000438196 145 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 AC080013.2-201ENST00000460866 323 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 UBE2DNL-203ENST00000474922 222 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 Y_RNA.713-201ENST00000517013 96 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 SCARNA3-201ENST00000517097 143 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 GTF3AP2-201ENST00000557014 266 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTCHD3Q3KNS1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.176-201ENST00000363815 109 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-611P-201ENST00000384276 104 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-1109P-201ENST00000391187 107 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AL139281.1-201ENST00000422120 335 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC112220.1-201ENST00000434628 355 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC010655.3-201ENST00000478818 450 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC145146.1-201ENST00000496370 254 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 SNORA25.11-201ENST00000515935 105 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 RN7SKP49-201ENST00000516675 260 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 CYCSP23-201ENST00000519781 313 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC026470.2-201ENST00000561492 181 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC078899.3-201ENST00000599065 212 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 SNRPGP20-201ENST00000604477 205 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 RPL17P51-201ENST00000605218 238 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.77□□□□□ -1.97
PTCHD3Q3KNS1 AC096644.4-201ENST00000563417 2912 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 MAPK10-266ENST00000641066 6555 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.149-201ENST00000363558 117 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 SNORD21-201ENST00000383953 95 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.458-201ENST00000384240 102 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-463P-201ENST00000384340 107 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 MIR487A-201ENST00000385009 80 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RPL30P4-201ENST00000429309 333 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 MTCYBP9-201ENST00000431021 303 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RPL21P2-201ENST00000440049 481 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-1143P-201ENST00000516125 104 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RNA5SP367-201ENST00000516557 118 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-1012P-201ENST00000516606 109 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 AC131281.1-201ENST00000522984 164 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 AC008269.2-201ENST00000561915 1105 ntBASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTCHD3Q3KNS1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC092593.1-201ENST00000515413 1815 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms