Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 EEF1B2P7-201ENST00000451177 676 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 RNU7-107P-201ENST00000459121 61 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 SRIP1-201ENST00000489235 288 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.91□□□□□ -1.78
NFKB1P19838 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.91□□□□□ -1.78
NFKB1P19838 AL606490.9-201ENST00000603331 271 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
NFKB1P19838 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.91□□□□□ -1.78
NFKB1P19838 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NFKB1P19838 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NFKB1P19838 AC000403.1-201ENST00000613696 3585 ntBASIC3.91□□□□□ -1.78
NFKB1P19838 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NFKB1P19838 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NFKB1P19838 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NFKB1P19838 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NFKB1P19838 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NFKB1P19838 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NFKB1P19838 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NFKB1P19838 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
NFKB1P19838 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NFKB1P19838 RNY1P11-201ENST00000363759 113 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 RNU6-1210P-201ENST00000363775 107 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 RNY3P5-201ENST00000384127 102 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 RNU6-476P-201ENST00000384726 107 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 MIR548B-201ENST00000385247 97 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 SNORA75.5-201ENST00000391291 81 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 RNU6-588P-201ENST00000410281 105 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.9□□□□□ -1.79
NFKB1P19838 TRBV12-2-201ENST00000489763 344 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 CYCTP-201ENST00000504253 315 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 RAC1P2-201ENST00000511164 579 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 Y_RNA.712-201ENST00000517011 92 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 AC022695.1-201ENST00000522089 237 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 AC090049.2-201ENST00000550377 109 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NFKB1P19838 MIR486-1-201ENST00000612171 68 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.9□□□□□ -1.79
NFKB1P19838 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NFKB1P19838 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NFKB1P19838 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NFKB1P19838 CENPCP1-201ENST00000533085 2578 ntBASIC3.9□□□□□ -1.79
NFKB1P19838 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NFKB1P19838 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
NFKB1P19838 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NFKB1P19838 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.89□□□□□ -1.79
NFKB1P19838 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 RNU6-383P-201ENST00000410864 94 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 AL445584.1-201ENST00000431451 330 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.89□□□□□ -1.79
NFKB1P19838 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.89□□□□□ -1.79
NFKB1P19838 RPS29P2-201ENST00000479278 136 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 MIR2116-201ENST00000517221 80 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.89□□□□□ -1.79
NFKB1P19838 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.89□□□□□ -1.79
NFKB1P19838 AC127455.1-201ENST00000565496 145 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.89□□□□□ -1.79
NFKB1P19838 MIR6875-201ENST00000617506 72 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 MIR548AY-201ENST00000617669 107 ntBASIC3.89□□□□□ -1.79
NFKB1P19838 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NFKB1P19838 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NFKB1P19838 AL513302.2-201ENST00000562313 1842 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
NFKB1P19838 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NFKB1P19838 AC026241.1-201ENST00000517873 2142 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NFKB1P19838 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NFKB1P19838 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
NFKB1P19838 RNU6-1298P-201ENST00000362456 101 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 SNORD114-7-201ENST00000362520 77 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNA5SP322-201ENST00000363617 119 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 U8.7-201ENST00000364940 136 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNU6-915P-201ENST00000364943 103 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 Y_RNA.525-201ENST00000384570 113 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 MIR147B-201ENST00000390185 80 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NFKB1P19838 RNU2-49P-201ENST00000410666 184 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.88□□□□□ -1.79
NFKB1P19838 HSPE1P21-201ENST00000438283 308 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNU1-61P-201ENST00000516107 151 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNA5SP76-201ENST00000516277 87 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNU7-115P-201ENST00000516433 55 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNA5SP309-201ENST00000516670 106 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 RNA5SP143-201ENST00000516936 115 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 AC007224.1-201ENST00000564410 144 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 MIR4644-201ENST00000579929 84 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 AC020914.4-201ENST00000597690 277 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 AL137849.1-201ENST00000604767 169 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
NFKB1P19838 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.88□□□□□ -1.79
NFKB1P19838 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.88□□□□□ -1.79
NFKB1P19838 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms