Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC244505.5-201ENST00000443639 207 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 OR2AQ1P-201ENST00000451972 200 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 C1DP4-201ENST00000455429 424 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AC098862.1-201ENST00000504991 413 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AL078604.3-201ENST00000615580 211 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AC072046.2-201ENST00000618366 268 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AL603755.1-201ENST00000619504 163 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 AL391262.2-201ENST00000622466 494 ntBASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LRRC40Q9H9A6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
LRRC40Q9H9A6 AC009541.1-201ENST00000438279 2662 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 SNORA63D-201ENST00000364359 132 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC090960.1-201ENST00000421072 306 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 MTCO2P3-201ENST00000442543 421 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC132479.1-201ENST00000449160 144 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC108210.2-201ENST00000503681 201 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 RNU6-856P-201ENST00000516959 98 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 MIR3913-1-201ENST00000577744 102 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 CTHRC1P1-201ENST00000605383 469 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 AC126177.8-201ENST00000618339 1015 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.33□□□□□ -2.2
LRRC40Q9H9A6 MTND5P35-201ENST00000557537 1720 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 RNU6-562P-201ENST00000362731 107 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 RNU6-1120P-201ENST00000362988 108 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 RNU6-517P-201ENST00000384362 110 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 RNU6-331P-201ENST00000384724 107 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 RNA5SP213-201ENST00000391031 106 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 SNORA17.3-201ENST00000391159 129 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AL117342.1-201ENST00000404861 406 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC060773.1-201ENST00000421698 310 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 CETN4P-201ENST00000432407 469 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AL121601.2-201ENST00000438019 707 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC069257.2-201ENST00000441819 155 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AL356010.1-201ENST00000456364 102 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC067942.3-201ENST00000512025 362 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 RNA5SP384-201ENST00000516615 116 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC068790.2-201ENST00000602601 557 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC008147.4-201ENST00000617570 1204 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC005858.4-201ENST00000623191 700 ntBASIC1.32□□□□□ -2.2
LRRC40Q9H9A6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MIR300-201ENST00000401138 83 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AL161935.2-201ENST00000414627 60 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MTATP6P18-201ENST00000417994 673 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AL358934.1-201ENST00000432346 324 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MTND4P32-201ENST00000437189 1237 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AL445567.1-201ENST00000439121 144 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MTND1P27-201ENST00000451117 902 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 snoU13.27-201ENST00000459278 104 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AC010486.2-201ENST00000505572 483 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AC011406.1-201ENST00000512440 370 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MIR5583-1-201ENST00000580941 59 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MTATP6P3-201ENST00000581686 676 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AP003465.2-201ENST00000602571 373 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 AP001596.2-201ENST00000608410 312 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 MIR7843-201ENST00000622274 79 ntBASIC1.31□□□□□ -2.2
LRRC40Q9H9A6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 SNORD73A-201ENST00000386062 65 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 MTCO2P11-201ENST00000431069 680 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AC073910.1-201ENST00000445047 438 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 snoU13.6-201ENST00000458785 104 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 RPL39P5-202ENST00000512505 151 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 HIF1AP1-201ENST00000553642 175 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AC015712.3-201ENST00000559380 164 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms