Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 RNU7-125P-201ENST00000458760 62 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC106038.2-201ENST00000520706 568 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 MTCYBP33-201ENST00000575007 1130 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC091135.1-201ENST00000585943 307 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AL022161.1-201ENST00000604390 213 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 RPL17P51-201ENST00000605218 238 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 LINC02555-201ENST00000563933 1951 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 SNORD115-7-201ENST00000365306 82 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 RNU6-438P-201ENST00000365561 103 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 MIR30A-201ENST00000385092 71 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 RPS29P13-201ENST00000402041 169 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 EPS15P1-201ENST00000448836 336 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC021146.2-201ENST00000504736 556 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 MTND1P22-201ENST00000510572 951 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC005741.1-201ENST00000511094 432 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 RNU6-496P-201ENST00000516145 99 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AL590229.1-201ENST00000603497 542 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC091304.9-201ENST00000612091 226 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC009159.2-201ENST00000617603 606 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 AC131159.1-201ENST00000621854 213 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 MIR1248-201ENST00000629190 106 ntBASIC1.01□□□□□ -2.25
SHANK3Q9BYB0 RNU6-222P-201ENST00000362438 107 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 Y_RNA.132-201ENST00000363421 102 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 RNU6-1164P-201ENST00000364428 107 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 Y_RNA.255-201ENST00000364581 97 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 RNY4P34-201ENST00000364779 95 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 RNU6-418P-201ENST00000384035 107 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1□□□□□ -2.25
SHANK3Q9BYB0 MIR1912-201ENST00000410389 80 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 RNA5SP501-201ENST00000410990 112 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 RNU2-41P-201ENST00000410991 178 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC244670.1-201ENST00000436879 112 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1□□□□□ -2.25
SHANK3Q9BYB0 AP002453.2-201ENST00000533503 320 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC009094.1-201ENST00000564443 426 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1□□□□□ -2.25
SHANK3Q9BYB0 MIR3923-201ENST00000579521 83 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC024933.1-201ENST00000608472 348 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 AL050303.3-201ENST00000613704 284 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 AC243829.3-201ENST00000622177 108 ntBASIC1□□□□□ -2.25
SHANK3Q9BYB0 RNA5SP499-201ENST00000363982 119 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 MIR508-201ENST00000384857 115 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 SNORA40.3-201ENST00000390964 122 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 RNA5SP201-201ENST00000410316 124 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC022364.2-201ENST00000457963 554 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 RNU1-131P-201ENST00000458943 161 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 MIR3169-201ENST00000578032 83 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 MIR4775-201ENST00000581168 75 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 MIR4422-201ENST00000581938 83 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 RSL24D1P11-201ENST00000591045 491 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AL451064.1-201ENST00000607718 471 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC027449.1-201ENST00000608890 407 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AL391262.2-201ENST00000622466 494 ntBASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.99□□□□□ -2.25
SHANK3Q9BYB0 AC092268.1-201ENST00000342691 405 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU4-48P-201ENST00000365559 182 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNA5SP511-201ENST00000410487 115 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RPL30P13-201ENST00000418873 348 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC104850.1-201ENST00000435940 476 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC021231.3-201ENST00000558497 370 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC091805.2-201ENST00000603848 235 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC072046.2-201ENST00000618366 268 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC009161.2-201ENST00000624626 138 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AL603839.4-201ENST00000624658 1005 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 SNORD98-201ENST00000636377 67 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC245060.5-201ENST00000610778 3293 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU4-15P-201ENST00000362613 141 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU6-743P-201ENST00000364151 106 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU6-45P-201ENST00000384471 107 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU6-393P-201ENST00000384475 107 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU6-550P-201ENST00000391057 101 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNA5SP25-201ENST00000410815 110 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 RNU4-46P-201ENST00000410818 138 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 MTCO3P41-201ENST00000414801 328 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 MTCO1P21-201ENST00000416634 589 ntBASIC0.98□□□□□ -2.25
SHANK3Q9BYB0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 279.6 ms