Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 U2.17-201ENST00000611454 95 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 RMST_7.1-201ENST00000621935 268 ntBASIC1.34□□□□□ -2.19
SCN4AP35499 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
SCN4AP35499 RNU6-1141P-201ENST00000364520 107 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 RNU4-56P-201ENST00000364700 142 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
SCN4AP35499 RNU4-46P-201ENST00000410818 138 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN4AP35499 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.33□□□□□ -2.2
SCN4AP35499 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN4AP35499 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN4AP35499 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN4AP35499 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SCN4AP35499 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN4AP35499 CBX3P7-201ENST00000532876 502 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AGGF1P4-201ENST00000568249 801 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 MIR548AC-201ENST00000585049 88 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC004223.2-201ENST00000590309 544 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AL136363.2-201ENST00000604173 851 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC097520.1-201ENST00000624435 385 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 Y_RNA.1-201ENST00000352915 104 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 SNORD114-6-201ENST00000364393 72 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 Y_RNA.381-201ENST00000365666 102 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 RNU6-843P-201ENST00000384454 104 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 SNORA12-201ENST00000391162 147 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AL133475.1-201ENST00000404414 305 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 RNA5SP450-201ENST00000411206 102 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 RPL30P4-201ENST00000429309 333 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 RPL31P35-201ENST00000431058 377 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN4AP35499 RPL31P3-201ENST00000458430 332 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC010424.1-201ENST00000506336 297 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC093259.1-201ENST00000509755 300 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC079140.3-201ENST00000511111 550 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 SNORA14.1-201ENST00000516113 141 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 PIGPP4-201ENST00000584447 307 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 NBR2-204ENST00000587322 63 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 SNRPGP17-201ENST00000603780 214 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC121247.2-201ENST00000604776 136 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 AC017083.3-201ENST00000609955 700 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 OR5AK4P-201ENST00000635912 903 ntBASIC1.33□□□□□ -2.2
SCN4AP35499 RNU6-78P-201ENST00000362897 107 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 SNORD56.1-201ENST00000362913 68 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU6-26P-201ENST00000383985 107 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU5A-6P-201ENST00000384136 116 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 SNORD73A-201ENST00000386062 65 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SCN4AP35499 AL512604.1-201ENST00000404812 257 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
SCN4AP35499 AC073464.1-201ENST00000429823 534 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.32□□□□□ -2.2
SCN4AP35499 HMGN1P33-201ENST00000432945 451 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.32□□□□□ -2.2
SCN4AP35499 AL353689.1-201ENST00000438895 199 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RPL23AP3-201ENST00000453844 468 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU1-98P-201ENST00000458992 160 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU7-138P-201ENST00000459479 64 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.32□□□□□ -2.2
SCN4AP35499 SNORD27.1-201ENST00000516319 72 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU6-965P-201ENST00000516721 96 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 AC069113.1-201ENST00000517763 267 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.32□□□□□ -2.2
SCN4AP35499 TRAV32-201ENST00000553993 340 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 AC021231.3-201ENST00000558497 370 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU6-89P-201ENST00000606519 100 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 AL442644.1-201ENST00000454390 3105 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 MTND4P14-201ENST00000435799 1354 ntBASIC1.32□□□□□ -2.2
SCN4AP35499 RNU1-58P-201ENST00000362413 163 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 Y_RNA.51-201ENST00000362725 102 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 RNU6-996P-201ENST00000365438 107 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 RNU6-541P-201ENST00000384709 110 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 MIR218-1-201ENST00000384999 110 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 RNU6-332P-201ENST00000391193 108 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN4AP35499 AL669831.1-202ENST00000428504 417 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 GTF2IP13-201ENST00000438487 386 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.31□□□□□ -2.2
SCN4AP35499 TPTE2P5-203ENST00000458118 728 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 KLF3P2-201ENST00000465138 268 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.31□□□□□ -2.2
SCN4AP35499 SCARNA24.1-201ENST00000516465 137 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 SNORD60.2-201ENST00000516883 86 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 RNU6-586P-201ENST00000517265 104 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.31□□□□□ -2.2
SCN4AP35499 HIF1AP1-201ENST00000553642 175 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN4AP35499 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN4AP35499 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN4AP35499 AC068790.2-201ENST00000602601 557 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL162413.1-201ENST00000603198 110 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC091805.2-201ENST00000603848 235 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCN4AP35499 AL354950.2-201ENST00000617939 290 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 Y_RNA.132-201ENST00000363421 102 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 RNU6-1317P-201ENST00000364582 104 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 MIR29C-201ENST00000385231 88 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 MIR676-201ENST00000390702 67 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms