Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 DEFB131E-201ENST00000532329 154 ntBASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 RN7SL435P-201ENST00000584418 282 ntBASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 AL672167.1-203ENST00000641299 2975 ntBASIC5.76□□□□□ -1.49
CCDC61Q9Y6R9 AC058791.1-201ENST00000608412 3198 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 Y_RNA.290-201ENST00000364879 114 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 SNORA62.3-201ENST00000365110 153 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 SNORA4.2-201ENST00000365313 147 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-1292P-201ENST00000383856 107 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 RN7SKP167-201ENST00000411047 285 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-504P-201ENST00000516568 104 ntBASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC61Q9Y6R9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 Y_RNA.66-201ENST00000362862 102 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-1240P-201ENST00000365155 104 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-1138P-201ENST00000365359 106 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 MIR670-201ENST00000390142 98 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 RPL21P3-201ENST00000395517 478 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 PTMAP2-201ENST00000397627 327 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 AC244098.2-201ENST00000422068 99 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 OR9P1P-201ENST00000496431 281 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 RNU7-149P-201ENST00000516739 59 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 HSPE1P5-201ENST00000561489 272 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 AC022254.1-201ENST00000567857 235 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 AL606490.9-201ENST00000603331 271 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 AC138965.3-201ENST00000623875 498 ntBASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC61Q9Y6R9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 AL592437.2-201ENST00000421655 2434 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RNY3P2-201ENST00000362918 102 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-776P-201ENST00000364403 104 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-1022P-201ENST00000365049 104 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 HMGN2P10-201ENST00000448085 265 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RPL23AP67-201ENST00000465341 474 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RPS27AP10-201ENST00000496103 208 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-830P-201ENST00000516353 107 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RNA5SP143-201ENST00000516936 115 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 AC006065.5-201ENST00000623427 349 ntBASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC61Q9Y6R9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 Y_RNA.203-201ENST00000364106 102 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 Y_RNA.486-201ENST00000384398 107 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 MIR586-201ENST00000385035 97 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-1197P-201ENST00000391183 107 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 MIR1179-201ENST00000408703 91 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 EIF4EP4-201ENST00000424916 578 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 SNORD11-201ENST00000459124 84 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 AC080013.2-201ENST00000460866 323 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 RPL27AP5-201ENST00000469428 449 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 RNU6-1149P-201ENST00000516810 97 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 MIR4666B-201ENST00000578142 81 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 MIR6075-201ENST00000620782 95 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 MIR6500-201ENST00000622700 86 ntBASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC61Q9Y6R9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC61Q9Y6R9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 RNU6-335P-201ENST00000364563 113 ntBASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 SNORA1-201ENST00000384107 130 ntBASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 Y_RNA.437-201ENST00000384113 113 ntBASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 RNU6-1181P-201ENST00000384191 106 ntBASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 SNORA1.3-201ENST00000384676 136 ntBASIC5.71□□□□□ -1.5
CCDC61Q9Y6R9 RNU6ATAC-201ENST00000408749 126 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms