Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RPL23AP75-201ENST00000491601 451 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 AF186996.7-201ENST00000492781 209 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 ANXA2P1-201ENST00000505539 926 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 RNU7-175P-201ENST00000515915 61 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 RNU6-570P-201ENST00000517051 105 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT40Q6A162 AC091544.4-201ENST00000555268 342 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT40Q6A162 MIR3128-201ENST00000581957 66 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 RPL23AP88-201ENST00000605759 454 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 SCARNA4-201ENST00000629045 128 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.4□□□□□ -1.87
KRT40Q6A162 AC233981.2-201ENST00000611524 1614 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.4□□□□□ -1.87
KRT40Q6A162 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
KRT40Q6A162 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT40Q6A162 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
KRT40Q6A162 RNU4-9P-201ENST00000364951 139 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 RPL23AP95-201ENST00000426806 265 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 AL121890.1-201ENST00000435457 205 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 TRBV12-1-201ENST00000479785 344 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 MRPL42P6-201ENST00000486397 371 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 Y_RNA.706-201ENST00000516933 99 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 AL391261.3-201ENST00000557194 520 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 AC136932.1-201ENST00000574771 208 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 AC096772.1-201ENST00000609146 564 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRT40Q6A162 AL672296.1-201ENST00000427780 2158 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.39□□□□□ -1.87
KRT40Q6A162 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT40Q6A162 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRT40Q6A162 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRT40Q6A162 SNORD56.1-201ENST00000362913 68 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 RNU6-1286P-201ENST00000383871 107 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 RNU6-968P-201ENST00000384076 107 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 Y_RNA.489-201ENST00000384410 101 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 RNY3P4-201ENST00000384428 101 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 MIR215-201ENST00000384858 110 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 NDUFS5P4-201ENST00000412983 318 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT40Q6A162 AC022018.1-201ENST00000430685 241 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 Z98949.2-201ENST00000440996 144 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 AC009296.1-201ENST00000443146 155 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.38□□□□□ -1.87
KRT40Q6A162 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT40Q6A162 snoU13.30-201ENST00000458951 104 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 RNA5SP310-201ENST00000459084 116 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 YWHAEP4-201ENST00000505390 198 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 AC006445.2-201ENST00000510061 472 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 CR383656.8-201ENST00000549046 145 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 SYF2P1-201ENST00000550658 413 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 HSPE1P7-201ENST00000604681 321 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 AC011373.1-201ENST00000607270 237 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 AP001282.2-201ENST00000616149 309 ntBASIC3.38□□□□□ -1.87
KRT40Q6A162 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRT40Q6A162 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT40Q6A162 snoU2_19.2-201ENST00000363024 80 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 RNU6-17P-201ENST00000384245 107 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 RNU6-18P-201ENST00000384527 107 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AC074117.2-201ENST00000417130 397 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 BPY2DP-201ENST00000422208 265 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AC139712.2-201ENST00000424302 339 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.37□□□□□ -1.87
KRT40Q6A162 RPL21P40-201ENST00000428586 483 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AL591043.1-201ENST00000432461 424 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 HMGN2P10-201ENST00000448085 265 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.37□□□□□ -1.87
KRT40Q6A162 RPS4XP13-201ENST00000483219 789 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 RNU6-581P-201ENST00000516214 105 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 SNORA31.23-201ENST00000517219 133 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AC090617.3-201ENST00000573670 475 ntBASIC3.37□□□□□ -1.87
KRT40Q6A162 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KRT40Q6A162 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT40Q6A162 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
KRT40Q6A162 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.36□□□□□ -1.87
KRT40Q6A162 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRT40Q6A162 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRT40Q6A162 RNU6-1301P-201ENST00000362724 104 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 Y_RNA.84-201ENST00000363011 104 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 U3.13-201ENST00000364804 214 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 Y_RNA.477-201ENST00000384352 108 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 RNA5SP213-201ENST00000391031 106 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.36□□□□□ -1.87
KRT40Q6A162 TMEM167AP1-201ENST00000423409 219 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT40Q6A162 SDAD1P3-201ENST00000427380 333 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 RPS29P6-201ENST00000438196 145 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT40Q6A162 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT40Q6A162 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.36□□□□□ -1.87
KRT40Q6A162 AC006026.2-201ENST00000457376 180 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT40Q6A162 TRBVB-201ENST00000477100 408 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 AP001025.1-201ENST00000486139 332 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 RNA5SP367-201ENST00000516557 118 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 MIR4435-1-201ENST00000582552 80 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 AC012433.1-201ENST00000588916 398 ntBASIC3.36□□□□□ -1.87
KRT40Q6A162 AC073410.2-201ENST00000603240 332 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 235.2 ms