Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.40-201ENST00000362645 93 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 RNY1-201ENST00000364228 113 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.785-201ENST00000384290 109 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.539-201ENST00000384635 107 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 AC145146.1-201ENST00000496370 254 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 AC010900.2-201ENST00000604508 210 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 AC098479.1-201ENST00000609225 154 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 TCL6_2.1-201ENST00000615162 119 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 IGHVIII-44-202ENST00000636235 289 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 NEAT1-202ENST00000501122 22743 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 CEP170P1-201ENST00000502249 4587 ntBASIC4.29□□□□□ -1.72
TMEM88BA6NKF7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 SNORD17-201ENST00000390930 237 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 RNA5SP475-201ENST00000410568 110 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 MTCO1P5-201ENST00000433573 344 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 MTND5P15-201ENST00000434246 349 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AC025750.2-201ENST00000442609 450 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AL138752.1-201ENST00000452964 351 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AC091179.3-201ENST00000474761 144 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 RN7SKP46-201ENST00000515942 234 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 RRN3P3-201ENST00000549207 578 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 MIR4276-201ENST00000584832 70 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AC008739.2-201ENST00000597006 317 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 AC008749.1-201ENST00000597650 306 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 SNORD11B-201ENST00000607707 90 ntBASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM88BA6NKF7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.28□□□□□ -1.73
TMEM88BA6NKF7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 MIR449A-201ENST00000362113 91 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 RNU4-15P-201ENST00000362613 141 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 Y_RNA.200-201ENST00000364018 102 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 RNU4-70P-201ENST00000384579 139 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 RAB28P5-201ENST00000427490 651 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 Z98742.2-201ENST00000431564 187 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AL136097.1-201ENST00000456945 913 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 RPL23AP70-201ENST00000483361 460 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 RAC1P2-201ENST00000511164 579 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 RNU6-344P-201ENST00000516635 111 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AL591424.2-201ENST00000617023 128 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AP000553.6-201ENST00000641242 118 ntBASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM88BA6NKF7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 MIR410-201ENST00000362222 80 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 MIR29B2-201ENST00000385055 81 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 RNA5SP424-201ENST00000390988 115 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 RNU1-101P-201ENST00000391171 127 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 OOSP1P1-201ENST00000423265 274 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AC006517.1-201ENST00000480485 328 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AC006380.1-201ENST00000603598 186 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AL033523.1-201ENST00000605153 153 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AC022441.3-201ENST00000605737 136 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AL590240.4-201ENST00000616908 390 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AC018692.3-201ENST00000623929 123 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 AC091152.2-201ENST00000591628 2569 ntBASIC4.26□□□□□ -1.73
TMEM88BA6NKF7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms